Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15] 2,733 sequences; 29,314,310 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq103 89.7 5e-13 >seq103 Length=87482 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 21469 CATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAA 21528 || ||| || ||||| || |||| ||| ||||| | |||||||| || || || Sbjct 35289 CAGCAAGCAGGCAAAGTCTGTGTGCAGACCCTCATCACGCGAGATTAATTCGTTGGAGAA 35230 Query 21529 TGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGA 21588 || | ||||||||| || || | ||| || | ||| || || || ||||| || || Sbjct 35229 GGTGAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAAGCAAAAGCACCGCT 35170 Query 21589 AAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTT 21648 |||||||| || || ||||||||||| ||||| || || | || | | |||||||| Sbjct 35169 GAAGAAAATACCTTCCACGGCAGCAAAAGCAACCAAGCGCTGGGCGAAGCTGGATTCTTT 35110 Query 21649 ATCCAATATCCA 21660 ||| ||||| Sbjct 35109 GTCCTGAATCCA 35098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531882628938920