Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq112 82.4 7e-11
>seq112
Length=75797
Score = 82.4 bits (90), Expect = 7e-11
Identities = 187/278 (67%), Gaps = 4/278 (1%)
Strand=Plus/Minus
Query 20377 GTGACAGGGCGGAAGCGCCATCAACGACA-AGTCCGCCGG-GTTCCACGCACACATAATG 20434
||||||||| || || ||||| | || || | | || |||||| || | |||||||
Sbjct 40765 GTGACAGGGAGGCAGGGCCATGA--GATGTAGATCTCGGGCGTTCCAAGCGCTCATAATG 40708
Query 20435 ATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCAAAC 20494
|| | || |||| ||| || || || ||| || | | || | | ||||| |
Sbjct 40707 ATGCGCCTGTCGTACGGCTTGTTCTTGATTTTGTCTATCACGTCGGCGAGCTGGTCGACT 40648
Query 20495 CCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGG 20554
|||| ||| | ||||| | | ||||| || || | || |||||||| | ||| |||
Sbjct 40647 CCCTTGCCGGCGTAGTCGGTCTTGGCGTCGACATATTCTGCGCCAAAGTGGCGCCATTGG 40588
Query 20555 AAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGG 20614
|| ||||| || || |||| || || || | ||||| ||||| | | | | |||
Sbjct 40587 AAGCCGTACACGGGACCCAGGTCGCCTACCTCGCGGTGCGTGAGGCCCAGGCTGTCGAGG 40528
Query 20615 AACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCC 20652
||||| | || || || |||||||||||||| ||
Sbjct 40527 AACTCGCGCGATCCGTTGCCATCCCATATCTTGACGCC 40490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441357721601720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |