Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq4 248 1e-60
>seq4
Length=676188
Score = 248 bits (274), Expect = 1e-60
Identities = 1120/1753 (64%), Gaps = 69/1753 (4%)
Strand=Plus/Minus
Query 113602 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTT 113661
||||||||| ||||||||||| ||| | |||||| | | ||||| || | | |||
Sbjct 641696 GTAGTACATGCCCGTCTTGAGGCCCAGTTTCCAGCCGGTAAAGTGCATGGAAGTGATCTT 641637
Query 113662 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 113721
| | || ||| | |||| | ||| | | ||||| || |||||||| ||
Sbjct 641636 GCCCATAGTGGGATCCTTCATGTGAATGTTAAGAGACTGGGACTGGTCGATGAAAGCACC 641577
Query 113722 ACGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAG 113779
||| || || ||||| | | || | || | || ||||||| |||||| |||||
Sbjct 641576 ACGGTCAGCAGCCATCTGCACGACGTG--TCGTTGAGAAATTTCCCAAACAGTTTTGTAG 641519
Query 113780 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACC 113839
|| || || || | ||||| | |||||| || ||||| ||| || | |
Sbjct 641518 AGAGCTTTGATGTCGGCCGGGATGTTGGGGATATTCTGAATGGA---ACCGTTCTCGGCA 641462
Query 113840 ATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGA 113896
|||| | | ||||||| | | ||||| || || || | |||||| | || ||
Sbjct 641461 ATGATACGGTTCTTCATAGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTCAGCAGC 641402
Query 113897 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTG 113956
|||||||| || ||||| || ||| || | | || || |||| ||||
Sbjct 641401 CAGGGGTTGACAACCTGGAATTCACCTGCCAGGACACGGCGTTGGTAAATGTTGGACGTG 641342
Query 113957 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGT 114016
|| ||||| ||||||||||||||||| | || || | ||| || || || ||||||||
Sbjct 641341 TAAGGCTCGAAGCACTCATTGTTACCTAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGG 641282
Query 114017 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAG 114076
|| | || || ||| || | || | ||| | || | ||||| || | |||
Sbjct 641281 GCGAGCAGCAGTGAGTTGCGAATTCCATGCTCCTTGATCTGCTCCTTCAGACTATTCCAC 641222
Query 114077 TCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCT 114136
|| || | | || | | | |||||| |||||||| || || || | ||||||
Sbjct 641221 TCCCAGAGGTCAGAAGGCTTCACGTCCCACATGTCAAACTGAAGAATGCCCTCGGAGGCG 641162
Query 114137 GGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCC 114193
|| || |||||||| || ||| || || | ||| ||||||||| ||| ||
Sbjct 641161 GGAGAGCCCTCAAAGGTAGAGTAAGGTCCTTGCTCCTTGGCCAATTCGACAGAG---GCA 641105
Query 114194 TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCG 114253
|||||| || || || || |||||||| || | || | | |||||| |
Sbjct 641104 GTGAGGGCAGCATGGTAGATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCCTCAGGG 641045
Query 114254 GAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 114313
|| ||||| | | || | || || | || |||||||| ||||| || | |||
Sbjct 641044 GACTCAAATGGCATGCGCAAGGCAAGGAAAGCGTCGGCGAGACCCTGGACGCCAACACCA 640985
Query 114314 ATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCG 114373
|| || || |||| ||| || || || || || ||||| || || |||
Sbjct 640984 ATCGGCCGGTGTCGCATGTTGCTGTTCCGGGCCTCCTGGACGGGGTAGTGGTTGACATCA 640925
Query 114374 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 114433
|| | || || || || || |||| |||| || || ||||| | | | ||
Sbjct 640924 ATGATTCTGTTCAGGTTGCGAACAACGACCTGGGTGACCTCGTGGAGCTTCTGGAAGTCG 640865
Query 114434 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG----GCGATTGACGCCAGATTACA 114489
| ||| ||| | | | | ||| ||| ||| || | || |||| || ||
Sbjct 640864 TA---GCGTCCCTCGTTGTAGTC-TACGAAGGCAGGCAGAGCCAGAGAGGCCAAGTTGCA 640809
Query 114490 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 114549
|||| | |||||| ||| |||||| | ||||||||| || | || || ||
Sbjct 640808 AACAGCGACCTCATCAGGGGCAGAGTACTCGACAATTTCCGTGCAAAGGTTGGAGCTGCG 640749
Query 114550 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 114609
|| || ||||||||||| || || ||| |||| || ||||||||||| |||||| |
Sbjct 640748 GATTGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAA 640689
Query 114610 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCA 114668
|| | |||||||| || |||| || || || | | ||||| | || | ||||
Sbjct 640688 AGGATTACCCGTCTCTGTCTGGGCCTCCAGGATGGAGTACCAGAGCTTCTG-----GGCA 640634
Query 114669 C-AGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTTGTGTAGAGGGCTTCAAAC 114721
| | ||| | || || |||| |||| ||| |||||| ||||| || ||||||
Sbjct 640633 CGAATGG---TCGCACGACCCTTGCCCTCACGCTCATACTTTTCATAGAGAGCCTCAAAC 640577
Query 114722 TCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTG 114780
|| || || | || | || || || || || | ||||| | |||| ||| |
Sbjct 640576 TCCTCGCCGTAGCAGTCAGCCAGGCC-GGGGCATTCGTTGGGGCACATCAGAGTCCAATC 640518
Query 114781 ACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATC 114840
||| || ||| || ||||||||||| || || || ||||| ||||| ||| | |||
Sbjct 640517 ACCGTTCTTCTCGACGCGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATC 640458
Query 114841 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 114900
||| || ||||||| | || ||||| ||||| || | || || | | |||
Sbjct 640457 ACGAGCACGGACTTCTTCCTTGCCGTGATTCTTTCGCAAATCAAGGAACTCAAACACATC 640398
Query 114901 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTG 114954
|||||||| || |||| ||| | || | | || | | || ||| ||||
Sbjct 640397 GGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCGCC---AGGTCGCTTGTTGCCACCCTG 640341
Query 114955 GTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTG 115014
|| ||||| || || ||| || || || |||||||| ||||||| ||||| ||
Sbjct 640340 GTCGACATATCTGGCCGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGT 640281
Query 115015 GCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCA 115072
|| || || || || || ||| | | |||| | | |||| | || ||
Sbjct 640280 CCCGTTGGTGCCGGCAATGTAGGAGCC--AGTGGCGCGAATGCGGTGGACATTCAAGCCG 640223
Query 115073 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCG 115132
||||| || ||| ||| ||||| ||||| | |||| || | ||||| || |||
Sbjct 640222 ATACCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCCTCG 640163
Query 115133 ATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT--GGTGTAC 115190
|| ||| |||| | ||| |||||||| ||||| || | || ||||| |
Sbjct 640162 ATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGACGACA--GCTGACATTGAGGTGTGC 640105
Query 115191 CAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACA--TACCTTGGGACATCTTATCGTA 115248
|||||||||| || || |||| ||||| |||| | | || |||||| || |||
Sbjct 640104 CAGCGTTGAATAGTGTGGGTGAGGCGTGTGTGAAGAGTTTGCT--GGACATGAGATGGTA 640047
Query 115249 GGTCTCCAAGAC---GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAA 115305
||| |||| ||| | | ||||| ||| | || |||| | ||| |||||||
Sbjct 640046 GGTTTCCAGGACTCGCTCAATATTGTCTCCCCAG---ATCCCGACAGCGACACGCATAAT 639990
Query 115306 CATGTATTGGGGT 115318
||||| ||||||
Sbjct 639989 CATGTGCTGGGGT 639977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597333192907640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |