Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15] 2,733 sequences; 29,314,310 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 163 3e-35 >seq4 Length=676188 Score = 163 bits (180), Expect = 3e-35 Identities = 585/912 (64%), Gaps = 2/912 (0%) Strand=Plus/Plus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||||| |||||| ||| ||||| ||| || || |||||| | | |||| | || | Sbjct 639912 TACTTTGGCTTCAAGACTTTGGAGCGGTCATATCTTCTCAAGCTCAACGGCAAGATTGTC 639971 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 |||||||| || || || | ||||| ||||| ||||||| || || | || | Sbjct 639972 GAGCGACCCCAGCACATGATTATGCGTGTCGCTGTCGGGATCTGGGGAGACAATATTGAG 640031 Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903 || || | | | |||| ||| | || ||| | || || Sbjct 640032 CGAGTCCTGGAAACCTACCATCTCATGTCCAGCAAACTCTTCACACACGCCTCACCCACA 640091 Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAA 93962 || |||||||| || || || ||| |||| || || ||||| | ||| | || Sbjct 640092 CTATTCAACGCTGGCACACCTCAATGTCAGCTGTCGTCTTGCTTCCTCGTCGAC-ATGAA 640150 Query 93963 GGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATA 94022 || ||| |||| || || | |||| |||||| ||| || | ||||| || Sbjct 640151 GGAGGACAGCATCGAGGGCATCTATGACACGCTCAAGACCTGCGCCATGATCTCCAAGAT 640210 Query 94023 CGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGG 94082 || || || ||||| | | ||||||| | | || |||| || |||||||| ||| Sbjct 640211 GGCTGGTGGTATCGGCTTGAATGTCCACCGCATTCGCGCCACTGGCTCCTACATTGCCGG 640270 Query 94083 TACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCG 94142 ||||| || || ||||| || || | || ||||| || || ||||||||| |||| | Sbjct 640271 CACCAACGGGACGTCCAATGGTGTCATTCCCATGCTTCGTGTTTTCAACAACACGGCCAG 640330 Query 94143 CTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTG 94202 || || ||||||||||| | | | || |||| || | || | ||||| || Sbjct 640331 ATATGTCGACCAGGGTGGCAACAAGCGACCTGGCGCTTTTGCCATTTACTTGGAGCCTTG 640390 Query 94203 GCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAG 94262 |||||| || ||| | ||| | || |||||||||| |||||||| || | | Sbjct 640391 GCACGCCGATGTGTTTGAGTTCCTTGATTTGCGAAAGAATCACGGCAAGGAAGAAGTCCG 640450 Query 94263 GGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAA 94322 || | || | ||| ||||| ||| | || || ||||| ||||| ||||||||||| Sbjct 640451 TGCTCGTGATTTATTCCTTGCTCTTTGGATTCCCGATCTTTTCATGAAGCGCGTCGAGAA 640510 Query 94323 AAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGG 94382 ||| | |||| ||| | || ||||| ||||| ||||| ||| | ||| | || Sbjct 640511 GAACGGTGATTGGACTCTGATGTGCCCCAACGAATGCCCCGGCCTGGCTGACTGCTACGG 640570 Query 94383 ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTAT 94442 | ||||| | | |||| || || ||||||||| | | || Sbjct 640571 CGAGGAGTTTGAGGCTCTCTATGAAAAGTATGAGCGTGAGGGCAAGGGTCGTGCGACCAT 640630 Query 94443 GGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTA 94502 ||| |||||| ||| | ||| |||| | ||| |||||||||| || | Sbjct 640631 TCGTGCCCAGAAGCTCTGGTACTCCATCCTGGAGGCCCAGACAGAGACGGGTAATCCTTT 640690 Query 94503 CATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAA 94562 ||| | | |||||| | |||| ||| ||||||| || || | || ||| Sbjct 640691 CATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGAACAATCCG 640750 Query 94563 GAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTG 94622 ||||| || || ||||| || ||||||||||| || | || || ||| | ||||| || Sbjct 640751 CAGCTCCAACCTTTGCACGGAAATTGTCGAGTACTCTGCCCCTGATGAGGTCGCTGTTTG 640810 Query 94623 TAACCTGGGCTC 94634 ||| ||| ||| Sbjct 640811 CAACTTGGCCTC 640822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494706299018680