Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq17 125 8e-24
>seq17
Length=354314
Score = 125 bits (138), Expect = 8e-24
Identities = 226/328 (69%), Gaps = 2/328 (1%)
Strand=Plus/Plus
Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTC 11735
||||| |||||| | |||||||||||||| || | ||| ||||| ||| |
Sbjct 273528 ACCGATAGCGTCCAACTCATCGATGAATATAATGGAAGGTGACTTGGCCTTTGCAGCCGC 273587
Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795
|| || ||||| ||||||||||| || || || || || |||||| |||| | | |
Sbjct 273588 AAAGAGCTCACGGACACGCTTCGCGCCCACGCCGACAAAGATCTCATCGAA-CTCACTAC 273646
Query 11796 AGAACA-CTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854
| ||| | || |||||| || || ||||| || | ||||| || || |||||||
Sbjct 273647 CGGACATGTAAAAGAAGGGGACCCCAGCTTCACCGGCCACAGCTCGGGCAAGTAGAGTCT 273706
Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAA 11914
| || || ||||| | |||| | ||||| |||| ||| | |||||| || ||
Sbjct 273707 TTCCTGTTCCAGGAGGACCAACCAGAAGCACGCCCTTGGGCAGCTTGGCGCCCAAGTCAG 273766
Query 11915 AGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGT 11974
|| | | ||||| ||||| ||||| ||||| | |||| ||| || |||||||| |
Sbjct 273767 AGAAACTTTCAGGATTCTTCAGGAATTCCACCACTTCCTGAAGCTCTTCCTTGGCCTCAT 273826
Query 11975 CGATACCCTCAACATCGGTGAAACGAGT 12002
| ||| | || || ||||||||||
Sbjct 273827 CACAACCATGGACGTCACTGAAACGAGT 273854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588955879107400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |