Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15] 2,733 sequences; 29,314,310 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq17 125 8e-24 >seq17 Length=354314 Score = 125 bits (138), Expect = 8e-24 Identities = 226/328 (69%), Gaps = 2/328 (1%) Strand=Plus/Plus Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTC 11735 ||||| |||||| | |||||||||||||| || | ||| ||||| ||| | Sbjct 273528 ACCGATAGCGTCCAACTCATCGATGAATATAATGGAAGGTGACTTGGCCTTTGCAGCCGC 273587 Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 || || ||||| ||||||||||| || || || || || |||||| |||| | | | Sbjct 273588 AAAGAGCTCACGGACACGCTTCGCGCCCACGCCGACAAAGATCTCATCGAA-CTCACTAC 273646 Query 11796 AGAACA-CTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854 | ||| | || |||||| || || ||||| || | ||||| || || ||||||| Sbjct 273647 CGGACATGTAAAAGAAGGGGACCCCAGCTTCACCGGCCACAGCTCGGGCAAGTAGAGTCT 273706 Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAA 11914 | || || ||||| | |||| | ||||| |||| ||| | |||||| || || Sbjct 273707 TTCCTGTTCCAGGAGGACCAACCAGAAGCACGCCCTTGGGCAGCTTGGCGCCCAAGTCAG 273766 Query 11915 AGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGT 11974 || | | ||||| ||||| ||||| ||||| | |||| ||| || |||||||| | Sbjct 273767 AGAAACTTTCAGGATTCTTCAGGAATTCCACCACTTCCTGAAGCTCTTCCTTGGCCTCAT 273826 Query 11975 CGATACCCTCAACATCGGTGAAACGAGT 12002 | ||| | || || |||||||||| Sbjct 273827 CACAACCATGGACGTCACTGAAACGAGT 273854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588955879107400