Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq112 107 2e-18
>seq112
Length=75797
Score = 107 bits (118), Expect = 2e-18
Identities = 193/280 (69%), Gaps = 8/280 (3%)
Strand=Plus/Minus
Query 30009 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 30068
||| || ||||| || |||||||| | ||| || |||||| |||| || |||||
Sbjct 40765 GTGACAGGGAGGCAGGGCCATGAGATGTAGATCTCGGGCGTTCCAAGCGCTCATAATGAT 40706
Query 30069 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC---CACGGCGTTTTGC-AGCTGATCCA 30124
||||||||| | || |||||| |||| ||| |||| || || ||||| || |
Sbjct 40705 GCGCCTGTCGTACGGCTTGTTCTTGATTTTGTCTATCACGTCG----GCGAGCTGGTCGA 40650
Query 30125 CCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACT 30184
| ||| | || | |||||| | | | ||| || ||||| || || || | ||| |
Sbjct 40649 CTCCCTTGCCGGCGTAGTCGGTCTTGGCGTCGACATATTCTGCGCCAAAGTGGCGCCATT 40590
Query 30185 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCA 30244
|||| |||||||| || |||||||| || | || | |||| || |||| |||| |
Sbjct 40589 GGAAGCCGTACACGGGACCCAGGTCGCCTACCTCGCGGTGCGTGAGGCCCAGGCTGTCGA 40530
Query 30245 AAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30284
|| || | || |||||| | ||||| ||||| || ||
Sbjct 40529 GGAACTCGCGCGATCCGTTGCCATCCCATATCTTGACGCC 40490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408603989586209
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |