Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15] 2,733 sequences; 29,314,310 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 7e-14 >seq4 Length=676188 Score = 91.5 bits (100), Expect = 7e-14 Identities = 208/313 (66%), Gaps = 0/313 (0%) Strand=Plus/Minus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||||||| | || | ||| || || ||| || | ||| |||||||| | ||| || Sbjct 640523 CCAATCACCGTTCTTCTCGACGCGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAA 640464 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 |||||| | || | | |||||| || |||||||||||| | ||| | ||| ||||| Sbjct 640463 TAAATCACGAGCACGGACTTCTTCCTTGCCGTGATTCTTTCGCAAATCAAGGAACTCAAA 640404 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085 | ||| | |||||| || || || || || |||||| || || || ||||| Sbjct 640403 CACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCGCCAGGTCGCTTGTTGCCACC 640344 Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145 || || || ||||| || || | |||||||| | ||| |||| | ||| | || Sbjct 640343 CTGGTCGACATATCTGGCCGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGA 640284 Query 26146 AAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACC 26205 ||||| |||| ||| | ||| || || | | ||| ||| ||| | || Sbjct 640283 CGTCCCGTTGGTGCCGGCAATGTAGGAGCCAGTGGCGCGAATGCGGTGGACATTCAAGCC 640224 Query 26206 GATTCCACCAGCC 26218 ||| ||||||||| Sbjct 640223 GATACCACCAGCC 640211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253031571632975