Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15] 2,733 sequences; 29,314,310 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq90 271 1e-67 seq126 214 2e-50 seq36 183 4e-41 seq6 165 1e-35 seq32 154 2e-32 seq5 147 3e-30 seq40 127 3e-24 seq23 93.3 6e-14 >seq90 Length=99827 Score = 271 bits (300), Expect = 1e-67 Identities = 555/815 (68%), Gaps = 15/815 (2%) Strand=Plus/Plus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 ||| | ||||| ||| | || || |||||||| || || || | ||||| || | | Sbjct 49999 GCTATGCGTCGTCTTCGCACGGCCTGTGAACGAGCGAAGCGTGCCCTCTCCGCT-CAACA 50057 Query 196121 CAA-ACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTAC 196179 ||| |||| |||||||||||||||||||| || || ||||||| || || | ||||| Sbjct 50058 CAACACAAACGTTGAGATTGATTCGTTGTTCGAGGGCATTGACTACTCCGCACCGATTAC 50117 Query 196180 CCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGA 196239 |||||| ||||| ||||| || | ||| |||| | | | | ||||| || Sbjct 50118 CCGTGCCCGTTTCGAAGAACTATGCCAAGATCTGTTCCGATCTACTCTCCAGCCTGTGGA 50177 Query 196240 ACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGG 196299 | || || |||||| || | || |||||| | || | || ||||| || ||||| Sbjct 50178 TCGCGTCCTCACTGACGCCAAACTCGACAAGTCTCAAGTCCACGACATTGTTCTAGTGGG 50237 Query 196300 AGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGC---TTCTTCAATAATAA 196356 ||| || || || ||||| |||| || || |||| | ||||||| || Sbjct 50238 AGGCTCTACTCGGATTCCTCGTGTTCA---GAATCTCATTAGCGACTACTTCAATGGCAA 50294 Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416 | | ||||| |||||||| || || || || || |||| || || || ||||| Sbjct 50295 AACGCCCAGCAAAAGCATCAACCCTGACGAGGCTGTAGCCAATGGCGCTGCTGTACAGGC 50354 Query 196417 TGCTATTCTCTCAGGTGTTGACAATAATAACGTC--CAA--GATCTTCTGCTACTTGATG 196472 |||||| | || || | | || | | | ||| ||| || | |||| ||||| | Sbjct 50355 TGCTATCTTGTCTGGAGAT-ACTACATCCAAGTCAACAAACGAAATCTTGCTTCTTGACG 50413 Query 196473 TTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATA 196532 ||||||| | || || || ||||||| || |||||| | ||||| || | ||| | Sbjct 50414 TTGCACCTCTCTCACTAGGCATTGAAACTGCTGGTGGTATGATGACAAAGTTGATTCCTC 50473 Query 196533 GGAACACAACTATTCCGACTAAGAAGGAACAAGTC-TTTTCAACGTATTCCGATAATCAA 196591 | |||||||| ||||| || |||||| | || | ||||| |||| ||| ||||| || Sbjct 50474 GAAACACAACCATTCCCACAAAGAAG-ACTGAGACGTTTTCGACGTTTTCAGATAACCAG 50532 Query 196592 CCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTA 196651 || || || | |||||||| || || || || ||| || | ||||| ||| | | Sbjct 50533 CCTGGCGTCCTCATTCAAGTGTACGAGGGTGAGCGCCAGCGCACTAAGGACAACAACTTG 50592 Query 196652 CTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAAT 196711 | || | ||||| | || || ||||| | || ||| | || ||||| |||||| | Sbjct 50593 ATGGGCAAATTCGAACTTACTGGCATTCCTCCCGCGCCCCGCGGAGTTCCTCAGATTGAA 50652 Query 196712 GTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCT 196771 ||| || ||| | || || ||||| || | ||||| | ||| ||| || | | || Sbjct 50653 GTTACATTTGATCTTGATGCCAATGGTATCATGAACGTGTCCGCTCTGGAGAAAGGTACT 50712 Query 196772 GGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATT 196831 ||||| || | |||||||| || |||||||||||||| || || || ||||| || || Sbjct 50713 GGCAAGTCCAACAAGATTGTCATCACCAATGACAAGGGTCGTCTGTCCAAGGAAGAGATC 50772 Query 196832 GAACGTATGGTTCAAGATGCGGAAAAGTACAGGGA 196866 || || ||||| || || ||||| | || ||| Sbjct 50773 GAGCGCATGGTAGCTGAAGCTGAAAAATTCAAGGA 50807 Score = 161 bits (178), Expect = 1e-34 Identities = 209/286 (73%), Gaps = 2/286 (1%) Strand=Plus/Plus Query 195704 AAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAG 195763 |||||||| || || ||||| || || ||||| | || || || || || ||||| ||| Sbjct 49582 AAAGATGCTGTAGTCACTGTTCCAGCATACTTTAACGACTCGCAGCGTCAAGCGACCAAG 49641 Query 195764 GACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGC 195822 ||||||| | | ||||| || | ||| |||| | || || ||||| || || || || Sbjct 49642 GACGCTGGTACCATTGCCGGAATCAACA-TCTTGCGTATCATTAATGAGCCCACTGCTGC 49700 Query 195823 TGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGA 195882 || ||||| || || || |||||||| || | || ||||| |||||||||| Sbjct 49701 AGCTATTGCGTACGGCCTTGACAAGAAGGCTGAAGGCGAGCGCAATGTGCTGATCTTTGA 49760 Query 195883 TCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGT 195942 || || || ||||| |||||||| || || | | |||||||| || || || ||||| Sbjct 49761 CCTTGGCGGAGGTACCTTTGATGTGTCTCTCTTGACTATTGAAGACGGAATCTTTGAAGT 49820 Query 195943 AAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||||| ||||||||||| || || | |||||||| ||||| ||| Sbjct 49821 GAAGGCCACTGCTGGTGACACCCACTTGGGTGGTGAGGATTTTGAT 49866 >seq126 Length=56475 Score = 214 bits (236), Expect = 2e-50 Identities = 749/1148 (65%), Gaps = 41/1148 (4%) Strand=Plus/Plus Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805 ||||| ||||| || || || || | || || || ||||| ||| || ||||| | Sbjct 40380 CAACGTCAGGCTACCAAAGATGCCGGTGTCATCGCCGGTCTCAACGTCCTCCGAATTGTG 40439 Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865 || || || || || || || || ||||| ||||||||||||| ||| || | | | Sbjct 40440 AACGAGCCCACCGCCGCCGCCATCGCTTACGGTCTGGACAAGACTGAGGGAGA-GCGACA 40498 Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 ||| || | | | |||||| ||||||||||| || |||||||| || || ||||| Sbjct 40499 AATC-ATCGTT-TATGATCTTGGTGGTGGTACTTTCGATGTCTCCCTCCTTTCCATTGAT 40556 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985 ||| | ||||| || ||||||||||||||| |||||||| ||||||||||||||| Sbjct 40557 CAGGGTGTTTTCGAGGTCCTGGCTACTGCTGGTGACACTCATCTGGGTGGTGAAGATTTC 40616 Query 195986 GA--TGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGA-AAGAATAAGAA---A 196039 || || | || | | || || | | || || | | ||||| || || Sbjct 40617 GACCAGCGCATCATTAAC--CACTTCGC-CAAGA---CCTACAATAAGAAGAACAATGTC 40670 Query 196040 GATATTTC--TGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCA 196097 |||||| | ||| || | |||| | || ||| | | || ||| |||| Sbjct 40671 GATATTACCAAGGACCTC--AAGGCTATGGGTAAGCTCAAGCGTGAGGCTGAGAAGGCCA 40728 Query 196098 AACGAACTCTCTCTTCTACGGCTCAAACAATGG--TTGAGATTGATTCGTTGTTTGACGG 196155 | || ||||| |||||| | | | | || | | | || ||||| | || ||||| || Sbjct 40729 AGCGTACTCTGTCTTCT-CAGAT-GAGCACTCGTATCGAAATTGAAGCTTTTTTTGAGGG 40786 Query 196156 AATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT 196215 | ||| |||| || | ||||| || || || ||| | ||| |||||||| Sbjct 40787 CAATGATTTCTCAGAGACGTTGACCCGCGCCAAGTTCGAGGAGCTCAACATGGATTTGTT 40846 Query 196216 TAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAA 196275 | |||| || | |||||||| || || || ||||| || | | ||| || | Sbjct 40847 CAAGAAGACCATCAAGCCTGTTGAGCAGGTCCTGAAGGACGCCAATGTCAAGAAGACTGA 40906 Query 196276 GGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCT 196335 | | || || ||||| || || || || || ||||||||||| ||| | || | | Sbjct 40907 GATCGACGACATTGTTCTCGTCGGTGGCTCCACCCGTATTCCCAAGGTCCAGGCCCTCAT 40966 Query 196336 TTCTAGCTTCTTCAAT---AATAAAGATTTAAACAAAACG-ATCAACCCGGATGAAGCAG 196391 | ||||| | || || | | | || | |||||||| ||||| || | Sbjct 40967 TGAGGAGTTCTTTGGTGGCAAGAAGGCCT----CGAAGGGTATCAACCCCGATGAGGCCG 41022 Query 196392 TTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCC 196451 |||| | |||||| ||||| ||||||| | |||| || || | || || | | | Sbjct 41023 TTGCCTTTGGTGCCGCCGTCCAGGCTGGTGTTCTTTCCGGCGAGGAAGGTACTGAGG--- 41079 Query 196452 AAGATCTTCTGCTACTTGATGTTGCACCCGTAT--CCCTGGGTCTTGAAACAGCGGGTGG 196509 ||||| | || | ||||| || || | | | || || |||| || | ||||| Sbjct 41080 -AGATC--GTTCTCATGGATGT--CAACCCTCTGACTCTTGGCATTGAGACCACTGGTGG 41134 Query 196510 TGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTT 196569 |||||||| || | ||| | ||||| ||||||| ||| ||| || |||| Sbjct 41135 AGTTATGACCAAGTTGATTCCCCGCAACACTCCTATTCCTACTCGCAAGAGCCAGATCTT 41194 Query 196570 TTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTC 196629 || || | | ||||| || || | || | ||| || || || || || ||||| || Sbjct 41195 CTCTACCGCTGCTGATAACCAGCCTGTGGTCCTTATCCAGGTCTACGAGGGCGAACGATC 41254 Query 196630 CCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACC 196689 | | ||||||||| || ||||||| ||||| | || || ||||| | || || Sbjct 41255 TCTCACCAAGGATAACAATAACCTTGGAAAGTTCGAGCTCACAGGCATTCCCCCCGCTCC 41314 Query 196690 CAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGT 196749 | |||||||| || ||| | || | ||||| | || || ||||| ||||| || || Sbjct 41315 TCGCGGTGTTCCTCAAATTGAGGTGTCGTTCGAGCTGGATGCCAATGGCATTCTCAAAGT 41374 Query 196750 CACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGG 196809 | |||| | ||||||| ||||||| || || || || ||||||||||| Sbjct 41375 CTCAGCCCACGACAAGGGCACTGGCAAGCAAGAGTCTATCACTATCACGAATGACAAGGG 41434 Query 196810 GCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGA 196869 || | | |||||||||| || || |||||| || || || |||||| || || Sbjct 41435 TCGTTTGACCCAGGAGGAAATCGACCGCATGGTTGCTGAGGCCGAGAAGTACGCCGAGGA 41494 Query 196870 AGACGAGG 196877 ||| ||| Sbjct 41495 GGACAAGG 41502 >seq36 Length=230664 Score = 183 bits (202), Expect = 4e-41 Identities = 160/199 (80%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || ||||| || ||||| || |||||||| ||||| || || | Sbjct 21272 GTATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTTGAGGTGGAATCTT 21213 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | |||||||| || ||| | || | ||||||||||| || ||||||||||| ||||| | Sbjct 21212 CTGACACAATAGACAACGTGAAGTCAAAGATTCAAGACAAAGAAGGCATTCCTCCCGACC 21153 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| || ||||| || || || ||||||||||| |||||||| || || || || |||| Sbjct 21152 AGCAGCGTCTTATCTTCGCCGGGAAACAGCTTGAGGATGGACGGACACTTGCAGACTACA 21093 Query 172040 ACGTTCAAAAGGAGTCTAC 172058 || |||| |||||||| || Sbjct 21092 ACATTCAGAAGGAGTCAAC 21074 Score = 181 bits (200), Expect = 1e-40 Identities = 181/234 (77%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || ||||||||||| || || || ||||| || ||||| ||||| || Sbjct 21788 ATGCAGATTTTCGTCAAAACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCATCT 21729 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||||| || ||||| || ||||| || || || Sbjct 21728 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCTGACCAA 21669 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||||||||| || |||||||| || || || |||||||| || |||||| Sbjct 21668 CAGCGTCTGATTTTTGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCGCAGACTACAAC 21609 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093 | || ||||| || ||||| || ||||| || | || || ||||| ||||| Sbjct 21608 ATCCAGAAGGAATCAACTCTCCATCTTGTGCTCCGCCTCCGTGGTGGCATGCAA 21555 Score = 172 bits (190), Expect = 7e-38 Identities = 169/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 171872 TTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCG 171931 |||| || || | || ||||| || || ||||||||||| || || || || || |||| Sbjct 21488 TTGTCAAGACTTTGACCGGAAAGACCATTACCCTCGAGGTGGAATCTTCTGATACTATCG 21429 Query 171932 ATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTA 171991 | || ||||| | ||||||||||| |||||||||||||| || || ||||| || || | Sbjct 21428 ACAATGTCAAATCAAAGATTCAAGACAAGGAAGGCATTCCTCCTGACCAGCAGCGTCTGA 21369 Query 171992 TTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGG 172051 |||| ||||| |||||| | ||||| || ||||| ||||| ||||| ||| | || |||| Sbjct 21368 TTTTCGCTGGCAAACAGTTGGAAGACGGCCGTACGCTCGCCGATTATAACATCCAGAAGG 21309 Query 172052 AGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| || || || |||||||| | || || || ||| Sbjct 21308 AGTCCACACTTCATCTTGTTCTCCGCCTCCGTGGCGGT 21271 >seq6 Length=626929 Score = 165 bits (182), Expect = 1e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||||| || || || || |||||||||||||| ||||| || Sbjct 11574 ATGCAGATTTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 11515 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| |||| || || || ||||| ||||| || || || ||| Sbjct 11514 GACACCATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 11455 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||||| || |||||||| || ||||| || ||||| || ||||| || || |||||| Sbjct 11454 CAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGGCCGACTACAAC 11395 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 | || |||||| || || ||| | || || | || || ||||||| Sbjct 11394 ATCCAGAAGGAGAGCACCCTGCACTTGGTGCTGCGCCTGCGTGGTGGTG 11346 >seq32 Length=259671 Score = 154 bits (170), Expect = 2e-32 Identities = 470/720 (65%), Gaps = 11/720 (2%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 ||||| ||||| ||||||| || || || ||||| || ||||| || | ||| ||| Sbjct 112447 ACTGTTCCTGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAGGATGCCGGTGCCATT 112388 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| || | || || || ||||| || || || || || || |||||| Sbjct 112387 GCTGGCCTCAACGTCCTCCGTATCATTAACGAACCCACTGCCGCCGCCATCGCATATGGT 112328 Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 |||| | |||| || | || || || |||||| |||||| ||||||||| Sbjct 112327 CTGGGCTCTGGCAAGTCTGAGAAGGAGCGTAACGTTCTGATCTATGATCTTGGTGGTGGT 112268 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || ||||| || || || || || | || ||| | ||| || ||||| || ||| Sbjct 112267 ACCTTCGATGTGTCTCTCCTTAACATCCAGGGCGGTGTTTTCACTGTCAAGGCCACCGCT 112208 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACG-TCTT-CTCCGTCATTTGTCTG 196013 ||||| || || || |||||| | |||||||| |||| ||| ||| || | Sbjct 112207 GGTGACACCCACCTTGGTGGTCAGGATTTCGA--CACGAACTTGCTCGACCACTGCAAGA 112150 Query 196014 ATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGC 196073 | || ||| || |||| ||||| ||| | || || | | ||||| || | | Sbjct 112149 AGGAATTCACCCGCAAGACCAAGAAGGATCTAAGCGGCGATGCCCGTGCTCTGCGAAGAC 112090 Query 196074 TTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTG 196133 || | ||||| || || |||||||| || || || || || || | | | | Sbjct 112089 TTCGAACTGCTTGCGAGCGTGCCAAGCGTACCCTGTCAAGCGGCGCCCAGGCTACCATCG 112030 Query 196134 AGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTG 196193 ||||||| || | || || || |||||| | || || ||||| ||||||| Sbjct 112029 AGATTGACTCTCTCTTCGATGGCGAGGACTTCACCCTGTCCATGACTCGTGCTCGTTTTG 111970 Query 196194 AAGAGTTAAACTCTGATTTGTT--TAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCG 196251 | || || ||| | | ||| || | | || ||||| | || || ||| Sbjct 111969 AGGACTTGAACGCCAAGGCGTTCGCTGGCA--CCCTCGAGCCTGTCGCCCAGGTCCTTAA 111912 Query 196252 TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCG 196311 || || || || ||| || ||||| || |||||| | || || || || ||||| Sbjct 111911 GGATGCTGCCATTGAAAAGGCTGCTGTTGAGGAGATTGTCTTGGTCGGTGGCTCCACCCG 111852 Query 196312 TATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAAC 196371 ||| || |||||||| || | || || |||||| | || | | | || | Sbjct 111851 TATCCCCAAGATTCAGAAGCTTCTGTCCGAGTTCTTCGACGGCAAGAAGCTCGAGAAGAG 111792 Query 196372 GATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431 |||||||| |||||||| || || || ||||| || || ||||| | ||||||||| || Sbjct 111791 CATCAACCCCGATGAAGCCGTCGCCTACGGTGCCGCTGTCCAGGCCGGTATTCTCTCCGG 111732 >seq5 Length=634825 Score = 147 bits (162), Expect = 3e-30 Identities = 141/181 (78%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930 || || || ||| | || || || || |||||||| ||||| ||||| || ||||||||| Sbjct 42533 TTCGTCAAGACCTTGACGGGTAAGACCATCACCCTAGAGGTCGAGTCCTCTGACACAATC 42474 Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990 || || ||||| ||||||| || |||||||| || ||||| || || ||||| ||| | Sbjct 42473 GACAATGTCAAATCCAAGATACAGGATAAGGAGGGTATTCCCCCTGACCAGCAGCGATTG 42414 Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050 || |||||||| || |||||||| ||||| || ||||| || || ||||| | || ||| Sbjct 42413 ATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACCCTGGCAGACTACAATATCCAGAAG 42354 Query 172051 G 172051 | Sbjct 42353 G 42353 >seq40 Length=207716 Score = 127 bits (140), Expect = 3e-24 Identities = 225/329 (68%), Gaps = 12/329 (4%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||||| || || |||| || || |||| || | ||||| || ||| Sbjct 185146 AAGATGAAGGAGACCGCTGAGTCTTATCTGTCCAAGCCTGTCAAGAACGCAGTGGTCACT 185087 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| || |||| |||| | || || ||| || ||||| |||| ||||| Sbjct 185086 GTGCCTGCCTATTTCAATGATGCCCAGCGTCAGAGTACCAAGGATGCTGGCCAGATTGCC 185027 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || ||| ||| | || |||| || || || || ||||| |||| || ||||| Sbjct 185026 GGCCTGAACGTACTTCGTGTTGTCAACGAGCCTACCGCTGCTGCCCTTGCGTACGGTCTA 184967 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATT---GATCTTTGATCTCGGTGGTGGTACG 195898 || ||| ||||| | | ||| | ||| ||||| ||||||||||| Sbjct 184966 GATAAG---------CAAGATGACAGTGTCGTCGCTGTCTACGATCTTGGTGGTGGTACT 184916 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 || ||| |||| |||| | ||| | ||| |||||||||| ||| | || |||| Sbjct 184915 TTCGATATCTCTATTCTGGAGATTCAGAATGGCGTATTCGAAGTCAAGTCGACCAATGGT 184856 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGA 195987 || || ||||| || |||||||| ||||| Sbjct 184855 GACACGCATCTTGGCGGTGAAGACTTCGA 184827 >seq23 Length=320936 Score = 93.3 bits (102), Expect = 6e-14 Identities = 159/226 (70%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 198549 ATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGT 198608 || || || || ||| | ||||| || | || |||||||| ||||| ||| | ||| Sbjct 129400 ATTCCTCGCGGAGCTATCCTCGCGGGACCTCCAGGTACTGGCAAAACGCTTATTGCTAAA 129341 Query 198609 GCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTGCTCCGCGG---CGAGTTTCATC 198665 || | || |||||||| |||| || || ||| || | | |||| ||| ||| | Sbjct 129340 GCCACGGCAGGTGAATCTGGTGTTCCATT-CTTTAGCG-TAAGCGGTTCCGAATTTG-TA 129284 Query 198666 GAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAA 198725 || ||||| |||||||||||| || || ||||| || || |||| ||| || | Sbjct 129283 GAAATGTTTGTTGGTGTTGGTCCTTCACGGGTCCGAGATCTATTTGCCGAAGGTCGCAAG 129224 Query 198726 AATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTA 198771 ||| ||| || ||||| ||||||||||| || || || |||||| Sbjct 129223 AATGCACCCTGCATCATTTTCATTGATGAAATCGATGCCATTGGTA 129178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657839925775760