Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15] 2,733 sequences; 29,314,310 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq36 158 1e-33 >seq36 Length=230664 Score = 158 bits (174), Expect = 1e-33 Identities = 175/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || ||| | | Sbjct 21270 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTTGAGGTGGAATCTTCT 21211 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| |||| | || || |||||| |||||||||||||| || |||||||| || Sbjct 21210 GACACAATAGACAACGTGAAGTCAAAGATTCAAGACAAAGAAGGCATTCCTCCCGACCAG 21151 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || ||| | ||||| |||||||||||||| |||||| || || || || |||| || | Sbjct 21150 CAGCGTCTTATCTTCGCCGGGAAACAGCTTGAGGATGGACG-GACACTTG-CAGACTACA 21093 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||||| ||||| || || | |||||||||||||| ||||| || ||| Sbjct 21092 ACATTCAGAAGGAGTCAACCTTGCACTTGGTGTTGCGTTTGCGTGGTGGC 21043 Score = 89.7 bits (98), Expect = 5e-13 Identities = 131/184 (71%), Gaps = 1/184 (1%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 ||||| || || ||||| ||||| || ||| | | || || | || | || ||| | Sbjct 21474 ACCGGAAAGACCATTACCCTCGAGGTGGAATCTTCTGATACTATCGACAATGTCAAATCA 21415 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| |||||||| ||||| || ||||| || || || ||| |||| || || || ||| Sbjct 21414 AAGATTCAAGACAAGGAAGGCATTCCTCCTGACCAGCAGCGTCTGATTTTCGCTGGCAAA 21355 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA- 24906 ||| |||| || | | | | ||||||||||| || ||||| || ||||| || Sbjct 21354 CAGTTGGAAGACGGCCGTACGCTCGCCGATTATAACATCCAGAAGGAGTCCACACTTCAT 21295 Query 24907 CTTG 24910 |||| Sbjct 21294 CTTG 21291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449882230373240