Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq103 105 2e-17
seq4 91.5 3e-13
>seq103
Length=87482
Score = 105 bits (116), Expect = 2e-17
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923
|| ||||||||| || |||||||| ||||| |||||||| | ||||||| |||
Sbjct 35137 GTTGCTTTTGCTGCCGTGGAAGGTATTTTCTTCAGCGGTGCTTTTGCTTCTATCTTCTGG 35196
Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983
|| ||||||||||| |||||||| || ||| | || ||||| |||| |||||| | |||
Sbjct 35197 CTGAAGAAGCGTGGCTTGATGCCCGGTCTCACCTTCTCCAACGAATTAATCTCGCGTGAT 35256
Query 131984 GAAGCATTGCATACTGAATTTGC 132006
|| | |||| || || |||||
Sbjct 35257 GAGGGTCTGCACACAGACTTTGC 35279
>seq4
Length=676188
Score = 91.5 bits (100), Expect = 3e-13
Identities = 217/322 (67%), Gaps = 7/322 (2%)
Strand=Plus/Plus
Query 110689 TTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA--- 110745
|||| ||| | | || |||||| |||| || | |||||| | || ||||| || |
Sbjct 640297 TTCCCATGCTTCGTGTTTTCAACAACACGGCCAGATATGTCGACCAGGGTGGCAACAAGC 640356
Query 110746 GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAG 110805
|| |||| | ||||| || || | || |||||||| | ||| | ||||| ||| | |
Sbjct 640357 GACCTGGCGCTTTTGCCATTTACTTGGAGCCTTGGCACGCCGATGTGTTTGAGTTCCTTG 640416
Query 110806 AACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGT 110865
| | || || ||||| || |||||| | || ||||||||||| ||| | |
Sbjct 640417 ATTTGCGAAAGAATCACGGCAAGGAAGAAGTCCGTGCTCGTGATTTATTCCTTGCTCTTT 640476
Query 110866 GGATTTCAGATTTATTCATGAAACGTGTTCAAGAA-AATGGCATGTGGTCTCTTATGTGT 110924
||||| | ||| | |||||||| || | || |||| || || ||| |||| |||||
Sbjct 640477 GGATTCCCGATCTTTTCATGAAGCGCG-TCGAGAAGAACGGTGATTGGACTCTGATGTG- 640534
Query 110925 CCTCATCG-TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGA 110983
|| || || | || || || |||| || || | |||||||| | || || ||
Sbjct 640535 CCCCAACGAATGCCCCGGCCTGGCTGACTGCTACGGCGAGGAGTTTGAGGCTCTCTATGA 640594
Query 110984 AAAATATGAAAAAGAAGGCAAG 111005
||| ||||| || ||||||
Sbjct 640595 AAAGTATGAGCGTGAGGGCAAG 640616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186771241895413
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |