Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq36 127 5e-24
>seq36
Length=230664
Score = 127 bits (140), Expect = 5e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||||||||| || ||||| | || |||||| |||||||
Sbjct 21267 CAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTTGAGGTGGAATCTTCTGAC 21208
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| | || || ||| |||||||||||| |||||||| ||| || ||| ||
Sbjct 21207 ACAATAGACAACGTGAAGTCAAAGATTCAAGACAAAGAAGGCATTCCTCCCGACCAGCAG 21148
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| |||||||||||||| || ||| | || |||||| |||| | || || |||||| |
Sbjct 21147 CGTCTTATCTTCGCCGGGAAACAGCTTGAGGATGGACGGACACTTGCAGACTACAACATT 21088
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382
||||| ||||| || | ||| | || |||
Sbjct 21087 CAGAAGGAGTCAACCTTGCACTTGGTGTTG 21058
Score = 102 bits (112), Expect = 2e-16
Identities = 134/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| ||||| || || || | || |||||| |||||| || |||| || || |
Sbjct 21474 ACCGGAAAGACCATTACCCTCGAGGTGGAATCTTCTGATACTATCGACAATGTCAAATCA 21415
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| ||| || ||| || | || || ||||| || ||
Sbjct 21414 AAGATTCAAGACAAGGAAGGCATTCCTCCTGACCAGCAGCGTCTGATTTTCGCTGGCAAA 21355
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||||||||||| || | || | |||||||| ||| ||||||| ||||| || |||||
Sbjct 21354 CAGTTGGAAGACGGCCGTACGCTCGCCGATTATAACATCCAGAAGGAGTCCACACTTCAT 21295
Query 206374 CTTGTT 206379
||||||
Sbjct 21294 CTTGTT 21289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181779416698093
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |