Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15] 2,733 sequences; 29,314,310 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq36 127 5e-24 >seq36 Length=230664 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||||||||| || ||||| | || |||||| ||||||| Sbjct 21267 CAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTTGAGGTGGAATCTTCTGAC 21208 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | || || ||| |||||||||||| |||||||| ||| || ||| || Sbjct 21207 ACAATAGACAACGTGAAGTCAAAGATTCAAGACAAAGAAGGCATTCCTCCCGACCAGCAG 21148 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||||||||| || ||| | || |||||| |||| | || || |||||| | Sbjct 21147 CGTCTTATCTTCGCCGGGAAACAGCTTGAGGATGGACGGACACTTGCAGACTACAACATT 21088 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382 ||||| ||||| || | ||| | || ||| Sbjct 21087 CAGAAGGAGTCAACCTTGCACTTGGTGTTG 21058 Score = 102 bits (112), Expect = 2e-16 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||| || || || | || |||||| |||||| || |||| || || | Sbjct 21474 ACCGGAAAGACCATTACCCTCGAGGTGGAATCTTCTGATACTATCGACAATGTCAAATCA 21415 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| || | || || ||||| || || Sbjct 21414 AAGATTCAAGACAAGGAAGGCATTCCTCCTGACCAGCAGCGTCTGATTTTCGCTGGCAAA 21355 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||||||||||| || | || | |||||||| ||| ||||||| ||||| || ||||| Sbjct 21354 CAGTTGGAAGACGGCCGTACGCTCGCCGATTATAACATCCAGAAGGAGTCCACACTTCAT 21295 Query 206374 CTTGTT 206379 |||||| Sbjct 21294 CTTGTT 21289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181779416698093