Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq4 250 3e-61
>seq4
Length=676188
Score = 250 bits (276), Expect = 3e-61
Identities = 1118/1751 (64%), Gaps = 65/1751 (4%)
Strand=Plus/Minus
Query 117842 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 117901
||||||||| ||||||||||| ||| | |||||| | | ||||| || | | |||
Sbjct 641696 GTAGTACATGCCCGTCTTGAGGCCCAGTTTCCAGCCGGTAAAGTGCATGGAAGTGATCTT 641637
Query 117902 GGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 117961
| | || ||| | |||| | ||| | | ||||| || |||||||| ||
Sbjct 641636 GCCCATAGTGGGATCCTTCATGTGAATGTTAAGAGACTGGGACTGGTCGATGAAAGCACC 641577
Query 117962 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCCTGTAG 118019
|| || || ||||| | | || | || | || ||||||| ||||| |||||
Sbjct 641576 ACGGTCAGCAGCCATCTGCACGACGTG--TCGTTGAGAAATTTCCCAAACAGTTTTGTAG 641519
Query 118020 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACC 118079
|| || || || | ||||| | |||||| || ||||| ||| || | |
Sbjct 641518 AGAGCTTTGATGTCGGCCGGGATGTTGGGGATATTCTGAATGGA---ACCGTTCTCGGCA 641462
Query 118080 ATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGA 118136
|||| | | ||||||| | | ||||| || || || | |||||| | || ||
Sbjct 641461 ATGATACGGTTCTTCATAGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTCAGCAGC 641402
Query 118137 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTG 118196
|||||||| || ||||| || ||| || | | || || |||| ||||
Sbjct 641401 CAGGGGTTGACAACCTGGAATTCACCTGCCAGGACACGGCGTTGGTAAATGTTGGACGTG 641342
Query 118197 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 118256
|| ||||| ||||||||||||||||| | || || | || || || || ||||||||
Sbjct 641341 TAAGGCTCGAAGCACTCATTGTTACCTAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGG 641282
Query 118257 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAG 118316
|| | || || ||| || | || | ||| | || | ||||| ||| | |||
Sbjct 641281 GCGAGCAGCAGTGAGTTGCGAATTCCATGCTCCTTGATCTGCTCCTTCAGACTATTCCAC 641222
Query 118317 TCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCT 118376
|| || | | || | | | |||||| |||||||| || || || | ||| ||
Sbjct 641221 TCCCAGAGGTCAGAAGGCTTCACGTCCCACATGTCAAACTGAAGAATGCCCTCGGAGGCG 641162
Query 118377 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCC 118433
|| || |||||||| || || || || | ||| ||||||||| ||| ||
Sbjct 641161 GGAGAGCCCTCAAAGGTAGAGTAAGGTCCTTGCTCCTTGGCCAATTCGACAGAG---GCA 641105
Query 118434 TCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCG 118493
|||||| || || || || || ||||| || | || | | |||||| |
Sbjct 641104 GTGAGGGCAGCATGGTAGATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCCTCAGGG 641045
Query 118494 GAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 118553
|| ||||| | | || | || || | || |||||||| ||||| || | |||
Sbjct 641044 GACTCAAATGGCATGCGCAAGGCAAGGAAAGCGTCGGCGAGACCCTGGACGCCAACACCA 640985
Query 118554 ATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCG 118613
|| || || |||| ||| || ||||| || || ||||| || || |||
Sbjct 640984 ATCGGCCGGTGTCGCATGTTGCTGTTCCGGGCCTCCTGGACGGGGTAGTGGTTGACATCA 640925
Query 118614 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 118673
|| | || || || || || |||| |||| || || ||||| | | | ||
Sbjct 640924 ATGATTCTGTTCAGGTTGCGAACAACGACCTGGGTGACCTCGTGGAGCTTCTGGAAGTCG 640865
Query 118674 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG----GCGATTGACGCCAGATTACA 118729
| ||| ||| | | | | ||| ||| ||| || | || |||| || ||
Sbjct 640864 TA---GCGTCCCTCGTTGTAGTC-TACGAAGGCAGGCAGAGCCAGAGAGGCCAAGTTGCA 640809
Query 118730 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTT 118789
|||| | |||||| ||| |||||| | |||||||||||| | ||| || ||
Sbjct 640808 AACAGCGACCTCATCAGGGGCAGAGTACTCGACAATTTCCGTGCAAAGGTTGGAGCTGCG 640749
Query 118790 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 118849
|| || ||||||||||| || || ||| |||| || ||||||||||| |||||| |
Sbjct 640748 GATTGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAA 640689
Query 118850 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCA 118908
|| | |||||||| || |||| || || || | | ||||| | || | ||||
Sbjct 640688 AGGATTACCCGTCTCTGTCTGGGCCTCCAGGATGGAGTACCAGAGCTTCTG-----GGCA 640634
Query 118909 C-AGTGGCGTTGGCTCGCCCCT---CTTC---CTCGTACTTTGTGTAGAGGGCTTCAAAC 118961
| | ||| | || || |||| | || ||| |||||| ||||| || ||||||
Sbjct 640633 CGAATGG---TCGCACGACCCTTGCCCTCACGCTCATACTTTTCATAGAGAGCCTCAAAC 640577
Query 118962 TCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTG 119020
|| || || | || | || || || || || | ||||| | |||| ||| |
Sbjct 640576 TCCTCGCCGTAGCAGTCAGCCAGGCC-GGGGCATTCGTTGGGGCACATCAGAGTCCAATC 640518
Query 119021 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 119080
||| || ||| || ||||||||||| || || || ||||| || || ||| | |||
Sbjct 640517 ACCGTTCTTCTCGACGCGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATC 640458
Query 119081 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 119140
||| || ||||||| | || ||||| ||||| || | || || | | |||
Sbjct 640457 ACGAGCACGGACTTCTTCCTTGCCGTGATTCTTTCGCAAATCAAGGAACTCAAACACATC 640398
Query 119141 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTG 119194
|||||||| || |||| ||| | || | | || | | || ||| ||||
Sbjct 640397 GGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCGCC---AGGTCGCTTGTTGCCACCCTG 640341
Query 119195 GTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTG 119254
|| ||||| || || ||| ||| || ||||||||||| ||||||| ||||| |||
Sbjct 640340 GTCGACATATCTGGCCGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGT 640281
Query 119255 GCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCA 119312
|| || || || || || ||| | | |||| | | ||||| | || ||
Sbjct 640280 CCCGTTGGTGCCGGCAATGTAGGAGCC--AGTGGCGCGAATGCGGTGGACATTCAAGCCG 640223
Query 119313 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCG 119372
||||| || ||| ||| ||||| ||||| | |||| || | ||||| || |||
Sbjct 640222 ATACCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCCTCG 640163
Query 119373 ATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCA 119432
|| ||| |||| | ||| ||||||||| ||||| ||| ||||| |||
Sbjct 640162 ATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGACGACAGCTGACATTGAGGTGTGCCA 640103
Query 119433 GCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACA--TACCTTGGGACATCTTGTCGTAGG 119490
|||||||| || || |||| ||||| |||| | | || |||||| | |||||
Sbjct 640102 GCGTTGAATAGTGTGGGTGAGGCGTGTGTGAAGAGTTTGCT--GGACATGAGATGGTAGG 640045
Query 119491 TCTCCAAGAC---GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACA 119547
| |||| ||| | | ||||| ||| | || |||| | ||| ||||||| ||
Sbjct 640044 TTTCCAGGACTCGCTCAATATTGTCTCCCCAG---ATCCCGACAGCGACACGCATAATCA 639988
Query 119548 TGTATTGGGGT 119558
||| ||||||
Sbjct 639987 TGTGCTGGGGT 639977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618414072707480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |