Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq112 98.7 9e-16
>seq112
Length=75797
Score = 98.7 bits (108), Expect = 9e-16
Identities = 109/141 (77%), Gaps = 6/141 (4%)
Strand=Plus/Plus
Query 34646 TATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTG 34705
|| |||||||| | |||||||| || || ||||| ||||||||||| || ||||| ||
Sbjct 40895 TACCAACGATCCTGCGACATGGGATTGGGCGTGCCCTTCAACATTGCGAGCTACGCGCTC 40954
Query 34706 CTCACGTACATGATCGCTCATGTCGTG-GGGTTGGTTCCTGGGGAGCTGGTGCATACGT- 34763
||||| |||||||||| |||| |||| | ||||| || || | || | || ||||
Sbjct 40955 CTCACCCACATGATCGCACATG-CGTGCGACTTGGTCCCCGGCAACCT--TACACACGTC 41011
Query 34764 -TGGGGGATGCGCATATCTAC 34783
|||| ||||||||| |||||
Sbjct 41012 ATGGGCGATGCGCATGTCTAC 41032
Score = 98.7 bits (108), Expect = 9e-16
Identities = 109/141 (77%), Gaps = 6/141 (4%)
Strand=Plus/Minus
Query 6562 GTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCC-CACGAC 6618
||||| ||||||||| |||| |||| || | || | || || ||||| | |||| |
Sbjct 41032 GTAGACATGCGCATCGCCCATGACGTGTGTA--AGGTTGCCGGGGACCAAGTCGCACG-C 40976
Query 6619 ATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCC 6678
||| |||||||||| ||||| || ||||| || ||||||||||| ||||| || || ||
Sbjct 40975 ATGTGCGATCATGTGGGTGAGGAGCGCGTAGCTCGCAATGTTGAAGGGCACGCCCAATCC 40916
Query 6679 CATGTCTCCCGATCGTTGATA 6699
|||||| | |||||||| ||
Sbjct 40915 CATGTCGCAGGATCGTTGGTA 40895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448247086235760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |