Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq112 113 3e-20
>seq112
Length=75797
Score = 113 bits (124), Expect = 3e-20
Identities = 207/301 (69%), Gaps = 8/301 (3%)
Strand=Plus/Minus
Query 27327 TACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGG 27386
|||||| ||||| | | |||| || ||||| || |||||||| | ||| ||
Sbjct 40786 TACGTAGAACTGGGCGAAGACGTGACAGGGAGGCAGGGCCATGAGATGTAGATCTCGGGC 40727
Query 27387 GTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC---CAC 27443
|||||| |||| || |||||||||||||| | || |||||| |||| ||| |||
Sbjct 40726 GTTCCAAGCGCTCATAATGATGCGCCTGTCGTACGGCTTGTTCTTGATTTTGTCTATCAC 40667
Query 27444 GGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACT 27502
| || || ||||| || || ||| | || | |||||| | | ||| || |
Sbjct 40666 GTCG----GCGAGCTGGTCGACTCCCTTGCCGGCGTAGTCGGTCTTGGCGTCGACATATT 40611
Query 27503 CTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 27562
|||| || || || | ||||||||| |||||||| || |||||||| || | || | ||
Sbjct 40610 CTGCGCCAAAGTGGCGCCATTGGAAGCCGTACACGGGACCCAGGTCGCCTACCTCGCGGT 40551
Query 27563 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 27622
|| || |||| |||| | || || | || |||||| | ||||| ||||| || |
Sbjct 40550 GCGTGAGGCCCAGGCTGTCGAGGAACTCGCGCGATCCGTTGCCATCCCATATCTTGACGC 40491
Query 27623 C 27623
|
Sbjct 40490 C 40490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369494892292523
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |