Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq5 129 6e-25
>seq5
Length=936409
Score = 129 bits (142), Expect = 6e-25
Identities = 483/747 (65%), Gaps = 18/747 (2%)
Strand=Plus/Minus
Query 16652 TGTTTATGAACAACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTT 16711
|||| |||| || || || |||| |||| || | ||| | || ||||| ||||| ||
Sbjct 248676 TGTTCATGA-CACCAGCC-TTCT--GGTAGTCACCAACTCTCTTCTCGAAGAAGTTGGTC 248621
Query 16712 TTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTA 16771
||||| | || || || ||||||||||| || || || || || ||| | || ||
Sbjct 248620 TTGCCAGCCAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCTTGGTAGATCTTG 248561
Query 16772 GAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAA- 16830
| | || || || || | | || || || || || || ||||||||||| |
Sbjct 248560 GGTTCGCCGAGGGCGAGGAGCAGACGGTCGGCAACGAACTCGATGTATTGGCACATGAGC 248501
Query 16831 TTCGCAGTTCATTCCTATAAGACGTAC-CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTA 16889
|| || |||||| || | ||| | || ||| || || || | || || ||||| |
Sbjct 248500 TTTGC-GTTCATGCCGAGGAGA-GCACACGGGAGGGCATCTGACAGGAACTCCTGCTCGA 248443
Query 16890 TAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGAT 16949
| | || || || | || || | || | || | || || | | || || |
Sbjct 248442 TGGCGACGGCCTCGGTGATGATCTCACGGACGAGCTCAGCAGAGGGCTTGTTCTTGAGGT 248383
Query 16950 GTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGT 17009
|| | ||| || || || || || | |||||||| | ||| || ||||
Sbjct 248382 GTGAGTGGAGCAGGCAGGCAAAGTCAGTGTGCATACCCTCGTCACGCGAGATGAGCTCGT 248323
Query 17010 TAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACG 17069
| || || || | || ||||| || || ||||| | ||| || || | ||||| |
Sbjct 248322 TGGAGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGG 248263
Query 17070 ACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCG 17129
| || || ||||| ||||||||||| | ||||| ||||| || || | | | ||||
Sbjct 248262 AACCCGAGAAGAAGATACCCTCGACAGCGGCAAAGGCGATCAAGCGGCAGCCAAAGGTCG 248203
Query 17130 CGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCG 17189
||| |||| | ||||| || | |||| ||||| ||| ||| |||||| ||
Sbjct 248202 AGTCCTTGTCGCAGATCCACTTGAGGGCCCAGTCGGCCTTTCTCTTGATGCAAGGAATGT 248143
Query 17190 TTTCTATGGCCTTAAA----TAATTTCTCTTTTTCCTGTAGG-TCGATTATATACGTATC 17244
| || ||||| || || || | | || | |||| ||| | || || || ||
Sbjct 248142 TCTCAATGGCGTTGAAGAGGTAGGTACGCTGCT-----TAGGTTCGCTGATGTATGTGTC 248088
Query 17245 GATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAA 17304
|||||| | ||| | |||||||| ||||||||||| ||||| || ||||| ||
Sbjct 248087 GATGAGCAATGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAA 248028
Query 17305 GCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCAC 17364
||||| ||| || | || || || || | ||| || || | || || ||||| ||
Sbjct 248027 GCATCTGGCCTCAGGGATCTGGACCTCGGAGCTGAAACGCTCGACGAGGTTCTCGTTGAC 247968
Query 17365 GATGCCGTCGCTCGCGGCGAAAAACGC 17391
||| ||||| || ||||| || ||
Sbjct 247967 GATACCGTCAGAGGCAGCGAAGAAAGC 247941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545328288560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |