Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq5 370 1e-97 seq40 134 1e-26 seq39 134 1e-26 seq21 111 2e-19 >seq5 Length=936409 Score = 370 bits (410), Expect = 1e-97 Identities = 572/803 (71%), Gaps = 15/803 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||| ||||||||| |||||||| || || |||||||||| ||||||| | || || Sbjct 247812 ATCTGGAACATGTACAAGAAGGCCGAAGCCTCTTTCTGGACCGCCGAGGAGATTGATCTT 247871 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | ||| | |||||| ||||||| |||||| Sbjct 247872 TCCAAGGACCTTCACGACTGGAACAGACGCCTCAACGACGACGAGCGTTTCTTCATCTCT 247931 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || ||||| ||| ||||| |||||||||||||| || ||||||||| Sbjct 247932 CACGTCCTCGCTTTCTTCGCTGCCTCTGACGGTATCGTCAACGAGAACCTCGTCGAGCGT 247991 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| |||| | |||| ||| | | ||||| | ||||||||||| || |||||| || Sbjct 247992 TTCAGCTCCG-AGGTCCAGATCCCTGAGGCCAGATGCTTCTACGGTTTCCAGATCATGAT 248050 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCTCTTCG 116929 ||||||| | ||||| || | || || ||||||||||| ||| | ||| | | Sbjct 248051 GGAGAACATTCACTCCGAGACCTACTCATTGCTCATCGACACATACATCAGCGAACCTAA 248110 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAA-GGC 116988 | | | | || | | | | |||||||| |||| || || ||| |||| ||||| ||| Sbjct 248111 GCAGCGTACCTACCTCT--TCAACGCCATTGAGAACATTCCTTGCATCAA-GAGAAAGGC 248167 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 ||| ||||| || |||||| || || || | |||| ||| ||| || | || Sbjct 248168 CGACTGGGCCCTCAAGTGGATCTGCGACAAGGACTCGACCTTTGGCTGCCGCTTGATCGC 248227 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 ||| || || |||||||| ||||||| ||||| ||||| |||| || |||||||| Sbjct 248228 CTTTGCCGCTGTCGAGGGTATCTTCTTCTCGGGTTCCTTCGCTTCCATCTTCTGGCTCAA 248287 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| || || |||||||| || || || ||| ||||||||||||||| | |||||||| Sbjct 248288 GAAGCGTGGTCTCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGG 248347 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGC 117228 | |||| ||||||||||| |||| | || | | | || || | Sbjct 248348 TATGCACACTGACTTTGCCTGCCTGCTCCACTCACACCTCAAGAACAAGCCCTCTGCTGA 248407 Query 117229 GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGC 117288 || |||| | |||||| ||||||| || ||||||||||||||| ||||| | || || Sbjct 248408 GCTCGTCCGTGAGATCATCACCGAGGCCGTCGCCATCGAGCAGGAGTTCCTGTCAGATGC 248467 Query 117289 GCTGCCG-GTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTC 117346 || ||| |||| ||| || || | || || || | |||| ||||||||||||||| Sbjct 248468 CCTCCCGTGTGC-TCTCCTCGGCATGAA-CGCAAAGCTCATGTGCCAATACATCGAGTTC 248525 Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406 || |||||| | ||||| |||| || | || ||||| |||| | | ||||||| Sbjct 248526 GTTGCCGACCGTCTGCTCCTCGCCCTCGGCGAACCCAAGATCTACCAAGCCACCAACCCC 248585 Query 117407 CTGGACTTTATGAACCTCATCTC 117429 | ||||| ||| | |||||| Sbjct 248586 TTCGACTTCATGGAGAACATCTC 248608 >seq40 Length=1419383 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| |||||||| |||| || ||| | || Sbjct 110586 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACACTCGAAGTTGAATCATCC 110527 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| ||| || | ||||| ||||| |||||| | ||||| Sbjct 110526 GACACAATCGACAACG-TCAAGTCAAAGATCCAAGACAAGGAGGGTATCCCCCCAGACCA 110468 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||| |||| || | || || ||| |||||||| Sbjct 110467 GCAGCGCCTCATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGCTCTCTGACTACAA 110408 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| | || ||||| || ||| Sbjct 110407 CATCCAGAAGGAGTCAACTCTGCACCTGGTG 110377 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||| || | || ||||| | || Sbjct 110814 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATTACTCTTGAGGTCGAGTCGTCC 110755 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| || ||||| ||| | ||||| Sbjct 110754 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAA 110695 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || ||||| ||||| || || | ||||| ||| |||||||||| Sbjct 110694 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTCTCCGACTACAAC 110635 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| |||| || || || || Sbjct 110634 ATCCAGAAGGAATCCACACTCCACCTTGT 110606 Score = 98.7 bits (108), Expect = 1e-15 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| |||||||| | || || || | | |||| | | |||| ||||| Sbjct 111018 ACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCTGACACTATCGACAACG-TCAAGAG 110960 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | |||||||||||||| || |||| ||||| || || |||| ||| ||||| Sbjct 110959 CAAGATCCAGGACAAAGAGGGCATTCCTCCGGATCAGCAGCGTCTTATCTTCGCTGGCAA 110900 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 || || || |||| || ||||| | |||||||||||| ||||||||| | || || || Sbjct 110899 GCAACTCGAAGACGGTCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCGACTCTTCA 110840 Query 40893 TCTAGT 40898 || || Sbjct 110839 CCTTGT 110834 >seq39 Length=1607033 Score = 134 bits (148), Expect = 1e-26 Identities = 152/201 (76%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| | || ||||| || |||||| | | Sbjct 1034766 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 1034825 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| |||||||| ||| |||||||||| || || Sbjct 1034826 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCT 1034884 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | ||||| || |||||||||||||||||| Sbjct 1034885 GATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAA 1034944 Query 40878 GGAGGCCACGCTGCATCTAGT 40898 |||| | || || || || || Sbjct 1034945 GGAGTCGACTCTTCACCTTGT 1034965 >seq21 Length=2295224 Score = 111 bits (122), Expect = 2e-19 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| |||||||||| || || |||| ||| ||||| ||||| || Sbjct 1877258 GACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAG 1877199 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || | ||||||||| |||||||||||||||||||||| ||| || || || || Sbjct 1877198 GATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGAGCACTCTTCACCTCGT 1877143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218929509920