Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq40 113 4e-20 seq39 111 1e-19 >seq40 Length=1419383 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || | ||| | ||||| ||| | || ||||| || || |||||||| || Sbjct 110359 ACCGCCACGAAGTCTGAGCACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGA 110418 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | || || |||||| | ||| ||||| ||| ||||||| |||||||| || || || Sbjct 110419 GAGCGTACGGCCATCCTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGG 110478 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGA 118689 || |||||||||||| || ||| || || | |||| ||||| | || | || | Sbjct 110479 GATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATTGTGTCGGATGAT-TCAA 110537 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||| || | || |||||||||||||| || || || |||||||| Sbjct 110538 CTTCGAGTGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 110586 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||| || || || || |||||||| ||| | |||||| |||||| ||||| Sbjct 110611 GTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTG 110670 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || ||||| |||| || ||||| || || || || ||||| |||||||| || || Sbjct 110671 CTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 110730 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| | ||||||||| | || | || ||||| || Sbjct 110731 GGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTAATGGTCTTGCCAGT 110790 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || ||||||||||| Sbjct 110791 GAGGGTCTTGACGAAAATCTGCAT 110814 Score = 100 bits (110), Expect = 2e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| ||||||| || || || ||||| || || ||| Sbjct 110846 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCGTCTTCGAGTTGCTTGCCA 110905 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| |||||||||||||| ||||| |||||||| ||||| || || || Sbjct 110906 GCGAAGATAAGACGCTGCTGATCCGGAGGAATGCCCTCTTTGTCCTGGATCTTGCTCTTG 110965 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCA 118716 || | |||| ||||| | ||| ||||| | || | || |||||||||| Sbjct 110966 ACGTTGTCGATAGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTGCCGGTCA 111020 >seq39 Length=1607033 Score = 111 bits (122), Expect = 1e-19 Identities = 145/200 (73%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||| | |||||| |||||||||||| ||||| Sbjct 1034953 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTTCCG 1034894 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| || |||||||| || || || |||||||||||||| || || || Sbjct 1034893 GCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 1034834 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | | ||||||||| | ||| | || ||||| || || || Sbjct 1034833 ACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTC 1034774 Query 118722 TTTACAAAAATCTGCATGGC 118741 || || || |||| |||| Sbjct 1034773 TTGAC--GAAGCTGCGTGGC 1034756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830177933064