Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq40 113 4e-20
seq39 111 1e-19
>seq40
Length=1419383
Score = 113 bits (124), Expect = 4e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || || | ||| | ||||| ||| | || ||||| || || |||||||| ||
Sbjct 110359 ACCGCCACGAAGTCTGAGCACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGA 110418
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| || || |||||| | ||| ||||| ||| ||||||| |||||||| || || ||
Sbjct 110419 GAGCGTACGGCCATCCTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGG 110478
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGA 118689
|| |||||||||||| || ||| || || | |||| ||||| | || | || |
Sbjct 110479 GATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATTGTGTCGGATGAT-TCAA 110537
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| |||| || | || |||||||||||||| || || || ||||||||
Sbjct 110538 CTTCGAGTGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 110586
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| ||| || || || || |||||||| ||| | |||||| |||||| |||||
Sbjct 110611 GTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTG 110670
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| ||||| |||| || ||||| || || || || ||||| |||||||| || ||
Sbjct 110671 CTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 110730
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| |||||| | ||||||||| | || | || ||||| ||
Sbjct 110731 GGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTAATGGTCTTGCCAGT 110790
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || |||||||||||
Sbjct 110791 GAGGGTCTTGACGAAAATCTGCAT 110814
Score = 100 bits (110), Expect = 2e-16
Identities = 127/175 (73%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || ||||||||||| ||||||| || || || ||||| || || |||
Sbjct 110846 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCGTCTTCGAGTTGCTTGCCA 110905
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| |||||||||||||| ||||| |||||||| ||||| || || ||
Sbjct 110906 GCGAAGATAAGACGCTGCTGATCCGGAGGAATGCCCTCTTTGTCCTGGATCTTGCTCTTG 110965
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCA 118716
|| | |||| ||||| | ||| ||||| | || | || ||||||||||
Sbjct 110966 ACGTTGTCGATAGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTGCCGGTCA 111020
>seq39
Length=1607033
Score = 111 bits (122), Expect = 1e-19
Identities = 145/200 (73%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| | |||||| |||||||||||| |||||
Sbjct 1034953 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTTCCG 1034894
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| || |||||||| || || || |||||||||||||| || || ||
Sbjct 1034893 GCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 1034834
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| |||||| | | ||||||||| | ||| | || ||||| || || ||
Sbjct 1034833 ACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTC 1034774
Query 118722 TTTACAAAAATCTGCATGGC 118741
|| || || |||| ||||
Sbjct 1034773 TTGAC--GAAGCTGCGTGGC 1034756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830177933064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |