Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq40 152 3e-32
seq39 93.3 3e-14
seq21 84.2 1e-11
>seq40
Length=1419383
Score = 152 bits (168), Expect = 3e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || || ||||||||||| | ||| || ||||| ||||||||||| ||
Sbjct 110360 CCGCCACGAAGTCTGAGCACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGAG 110419
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| |||| | || ||||||||||| || ||||| ||||| ||||||||||| |||
Sbjct 110420 AGCGTACGGCCATCCTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGG 110479
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| |||||| ||| | | | | || | |||| ||||| ||
Sbjct 110480 ATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATTGTGTCGGATGATTCAACT 110539
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| |||||||| ||||| || || |||||||||||
Sbjct 110540 TCGAGTGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 110586
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| |||||||||||||| || ||| | || || | ||||||||| || ||
Sbjct 110623 TTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAA 110682
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| || ||||| ||||| ||| | || |||||||| ||||| ||| | ||
Sbjct 110683 GATCAGGCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACATT 110742
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | |||| ||| ||||| || | || ||||| ||||| ||||| || || ||
Sbjct 110743 GTCGATGGTGTCGGACGACTCGACCTCAAGAGTAATGGTCTTGCCAGTGAGGGTCTTGAC 110802
Query 34378 AAAGATCTGCAT 34389
|| ||||||||
Sbjct 110803 GAAAATCTGCAT 110814
>seq39
Length=1607033
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || ||||| | ||| || ||||| |||||||||||||| || ||| | ||
Sbjct 1034968 AGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 1034909
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||| || ||||| || || ||||||||||| ||| | || |||||||||
Sbjct 1034908 TCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 1034849
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | |||| || ||||| || | ||||||||
Sbjct 1034848 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTC 1034789
Query 34358 TTGCCGGTGAGAGTTTTCACAAAG 34381
||||| || || || || || |||
Sbjct 1034788 TTGCCCGTAAGGGTCTTGACGAAG 1034765
>seq21
Length=2295224
Score = 84.2 bits (92), Expect = 1e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || ||||| | ||| || || ||||| |||||||||||||| || ||| | ||
Sbjct 1877140 AGGACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1877199
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|| | ||||||||| ||||| || || ||||||||||| ||| | | |||||||||
Sbjct 1877200 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 1877258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071834627520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |