Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq40 342 5e-89 seq5 187 2e-42 seq39 87.8 2e-12 >seq40 Length=1419383 Score = 342 bits (378), Expect = 5e-89 Identities = 653/954 (68%), Gaps = 11/954 (1%) Strand=Plus/Plus Query 23028 AGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATA 23087 || |||| ||||| ||||| ||||| || | |||||||| | ||||| || || | Sbjct 1017435 AGCCAAG-TTGCAGACGGCGACCTCATCAGGAGCAGTGTACTCGATGATTTCAGTGCACA 1017493 Query 23088 GATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCT 23147 | ||| | || || | || |||||||||| || || ||||| | ||||| Sbjct 1017494 GGTTGGAGCTGCGAATGACACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCT 1017553 Query 23148 TGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAG 23207 |||| |||||| | || | || |||||| ||| | ||||| ||| || ||||| Sbjct 1017554 TGTACAGCATGAAGGGGTTACCGGTCTCGGTCTGAGCCTCGAGGATAGCGTACCACAGCT 1017613 Query 23208 TCTGAGCGTGAACAC-GTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCG 23266 |||| ||| | | ||||| || |||||| ||||||||| | ||||| | Sbjct 1017614 TCTGGGCGCGGATGGTGTCGCGACCACG-GCCTTCGCGCTCGTACTTCTCGTACAGAACC 1017672 Query 23267 TCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTC 23326 || || ||| | ||||| |||||||| || || ||| | || ||||| ||| || Sbjct 1017673 TCGAACTCGTCGCCGTACACGTCGGCCAAACCAGGACATTCACTGGGGCACATCAGAGTC 1017732 Query 23327 CACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAAC 23386 || | |||| | || || || |||| || ||||| || ||||| ||||||||||| Sbjct 1017733 CAGGTGGAGTTCTGCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAAG 1017792 Query 23387 AGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAAC 23446 || |||||||| || || ||||| || || |||||| | ||| | ||| | || Sbjct 1017793 AGATCGCGGGCACGAACTTCCTCCTTACCATGGTTCTTGCGGAGATCGAGGAAGGCGAAG 1017852 Query 23447 ACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCC 23506 ||||| || ||||| ||||||||||| | ||| || || || || | ||| ||||||||| Sbjct 1017853 ACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCGCCC 1017912 Query 23507 TGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGAC 23566 ||||||||||| | ||| ||||||||| | || | ||||| |||||||| |||||||| Sbjct 1017913 TGATCGACGTATCTGGCAGTGTTGTTGAAAACACGGAGCATGGGCACGAGGCCGTTGGAT 1017972 Query 23567 GCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCT 23626 | |||| || || | || || | || |||| | |||| ||| || ||| Sbjct 1017973 GTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACGAATGCAGTGAGCGTTGAGACCA 1018032 Query 23627 ATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCG 23686 ||||| || | || || ||||| ||||| || || |||||||| ||||| || Sbjct 1018033 ATGCCACCTGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAAATGCCATCA 1018092 Query 23687 ATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCG 23746 || ||| || || | | | |||||| || |||| | ||| | | || || || Sbjct 1018093 ATTGAGTCGTCCTTCATATCAATCAAGAAGCATGAAGCGAGTTGAGGCTGAGGAGTTCCG 1018152 Query 23747 GCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTA-TCCATTCGACATTAGATTGTACGT 23805 || ||| || || || |||||| || ||||| | | | ||||| || ||||| || Sbjct 1018153 GCACTGAAGAGGGTGGGCGAGGCGTGAGTGAAGTACTTGAGT-GACATAAGGTTGTATGT 1018211 Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865 || ||||| || || || ||||| || || ||||| | ||||| ||||| ||||| | Sbjct 1018212 CTCAATGGCAGCCTCGATATCCTCGCCATGGATACCAACAGCGACACGCATGATCATCTG 1018271 Query 23866 TTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGT 23922 || ||||||| ||||| | ||| | | | ||| ||||||||||||| || || Sbjct 1018272 CTGGGGTCTCTCGGCGACCTT---GCCCTCGAGTCTGAGGAGATATGAACGTTCCAAAGT 1018328 Query 23923 TTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 || || || || || | ||||| || || | |||| || ||||| || || Sbjct 1018329 CTTGAAACCGAAGTACTGGTAGTTGAAATCTCTGTCGTAGACGATGGCTGAGTT 1018382 Score = 116 bits (128), Expect = 3e-21 Identities = 176/242 (73%), Gaps = 10/242 (4%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| ||||| || ||||| |||| |||||| | ||| Sbjct 110586 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACACTCGAAGTTGAATCATCC 110527 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || || || |||||||| || | || || ||||| Sbjct 110526 GACACAATCGACAACGTCAAGTCAAAG-ATCCAAGACAAGGAGGGTATCCCCCCAGACCA 110468 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA---CTCTATGACTATGAGCGATTA 31368 |||||| || || ||||| || || |||||||| || | || | || | || || Sbjct 110467 GCAGCGCCTCATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACG-CTCT--CTGACTA 110411 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT-AG-AAGC 31426 ||||| || || || || ||||| || ||||| || ||||| | |||||| || |||| Sbjct 110410 CAACATCCAGAAGGAGTCAACTCTGCACCTGGTGCTCAGACTTCGTGGCGGTCAGTAAGC 110351 Query 31427 GG 31428 || Sbjct 110350 GG 110349 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 31215 TGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAAC 31274 |||| ||||| || ||||| | || ||||| | || |||| | |||| | ||||| Sbjct 111020 TGACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCTGACACTATCGACAACGTCAA-- 110963 Query 31275 AGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTG 31331 ||| || | | |||||| || ||| | || || || ||||||||||| || ||||||| Sbjct 110962 -GAGCAAGATCCAGGACAAAGAGGGCATTCCTCCGGATCAGCAGCGTCTTATCTTCGCTG 110904 Query 31332 GCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTC 31391 |||| || | |||||| | || ||||||| || |||||||| || || ||||||| Sbjct 110903 GCAAGCAACTCGAAGACGGTCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCGACTC 110844 Query 31392 TTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||| || || ||| | ||| | || |||| Sbjct 110843 TTCACCTTGTCCTTCGTCTGCGTGGTGGTA 110814 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || ||||| || || || | || || || ||||| Sbjct 110814 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATTACTCTTGAGGTCGAGTCGTCC 110755 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||||||| | || || ||||| Sbjct 110754 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAA 110695 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || |||||||| ||| | || || ||| | ||| || ||| Sbjct 110694 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTCTCCGACTACAAC 110635 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||| || || || || || || Sbjct 110634 ATCCAGAAGGAATCCACACTCCACCTTGTCCT 110603 >seq5 Length=936409 Score = 187 bits (206), Expect = 2e-42 Identities = 586/895 (65%), Gaps = 31/895 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || |||||||||||||| ||||| ||||| || || ||||||| ||| || | || || Sbjct 247812 ATCTGGAACATGTACAAGAAGGCCGAAGCCTCTTTCTGGACCGCCGAGGAGATTGATCTT 247871 Query 57630 TCTAAGGATCTGAGCGATTGGGATTC---CCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||| | |||||| || ||| | || || Sbjct 247872 TCCAAGGACCTTCACGACTGGAACAGACGCCTCAACGACGACGAGCGTTTCTTCATCTCT 247931 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||| || || || ||||| || |||||||| | ||||| | Sbjct 247932 CACGTCCTCGCTTTCTTCGCTGCCTCTGACGGTATCGTCAACGAGAACCTCGTCGAGCG- 247990 Query 57747 TTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 ||||| || || || | | ||||| |||||||| ||||| || || | | Sbjct 247991 -TTTCAGCTCCGAGGTCCAGATCCCTGAGGCCAGATGCTTCTACGGTTTCCAGATCATGA 248049 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864 | || ||| | || || || | || || | |||||||| || ||| | | || | | Sbjct 248050 TGGAGAACATTCACTCCGAGACCTACTCATTGCTCATCGACACATACATCAGCGA-ACCT 248108 Query 57865 ACGAGAAACGTAGA---CTGTTCAACGCGATCGA-AACAATGCCCGCGATCGCCAAGAAG 57920 | || | |||| || |||||||| || || |||| | | || ||| | ||| Sbjct 248109 A--AGCAGCGTACCTACCTCTTCAACGCCATTGAGAACATTCCTTGC-ATCAAGAGAAAG 248165 Query 57921 GCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACG---TTCGCCGAGAGGCTA 57977 || || ||| | |||| ||||| ||| || || | || || | | | | Sbjct 248166 GCCGACTGGGCCCTCAAGTGGATCT---GCGACAAGGACTCGACCTTTGGCTGCCGCTTG 248222 Query 57978 ATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGG 58037 ||||| || ||||| ||||| ||||| ||||| ||||| ||| || | || || ||| Sbjct 248223 ATCGCCTTTGCCGCTGTCGAGGGTATCTTCTTCTCGGGTTCCTTCGCTTCCATCTTCTGG 248282 Query 58038 ATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGAC 58097 | ||||| || || || ||||| || || || || ||||||| | || ||||| ||| Sbjct 248283 CTCAAGAAGCGTGGTCTCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCGCGTGAC 248342 Query 58098 GAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACG 58157 |||||| | || ||||| ||||| ||||| | |||| ||| | || || || | Sbjct 248343 GAGGGTATGCACACTGACTTTGCCTGCCTGCTCCACTCACACCTCAAGAACAAGCCCTCT 248402 Query 58158 CGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT--TGTCA 58215 || | | || || || ||||||||||| ||||| ||||| | ||||| ||||| Sbjct 248403 GCTGAGCTCGTCCGTGAGATCATCACCGAGGCCGTCGCCATCGAGCAGGAGTTCCTGTCA 248462 Query 58216 CCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTG 58275 || ||||| ||| || | ||||| |||||| | | |||| | ||||| | Sbjct 248463 --GATGCCCTCCCGTGTGCTCTCCTCGGCATGAACGCAAAGCTCATGTGCCAATACATCG 248520 Query 58276 AGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCA---TTACAACACGA 58332 |||| ||||||||| | || | |||| | | || || | | ||| | | | Sbjct 248521 AGTTCGTTGCCGACCGTCTGCTCCTCGCCC---TCGGCGAACCCAAGATCTACCAAGCCA 248577 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaa 58392 || || || || || ||| | |||||||| | |||||||| ||||| ||||| | Sbjct 248578 CCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCTGGCAAGACCAACTTCTTCGAGA 248637 Query 58393 aaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGCGGTAACAAGTTGGAGGA 58447 | | |||| | || || || || || || |||| | | | ||| |||||| Sbjct 248638 AGAGAGTTGGTGACTACCAGAAGGCTGGTGTCATGAACAGCACAAAGAAGGAGGA 248692 >seq39 Length=1607033 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| || || ||||| || |||||| | || || || | ||||||| || Sbjct 1034766 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 1034825 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | ||||| | || ||||||||| ||| | || || ||||||||||| || Sbjct 1034826 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 1034885 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || ||||| || || ||| | || || ||| | ||| || ||||| || || Sbjct 1034886 ATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAAG 1034945 Query 31382 GAATCGACTCTTCATCTGGTACT 31404 || ||||||||||| || || || Sbjct 1034946 GAGTCGACTCTTCACCTTGTCCT 1034968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766165972640