Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq40 183 4e-41 >seq40 Length=1419383 Score = 183 bits (202), Expect = 4e-41 Identities = 473/716 (66%), Gaps = 6/716 (1%) Strand=Plus/Plus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 ||||||||||| || | || | | |||| |||||||||||| || ||||||| | | Sbjct 1017673 TCGAACTCGTCGCCGTACACGTCGGCCAAACCAGGACATTCACTGGGGCACATCAGAGTC 1017732 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101 || || | || || || ||||| ||||||||||| ||||| ||||| || Sbjct 1017733 CAGGTGGAGTTCTGCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAAG 1017792 Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161 | ||| | || | | |||||| || || ||||| ||||||||||| || | Sbjct 1017793 AGATCGCGGGCACGAACTTCCTCCTTACCATGGTTCTTGCGGAGATCGAGGAAGGCGAAG 1017852 Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221 | || ||||| || || | ||| ||||| | | ||||| || ||||| || ||| Sbjct 1017853 ACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCGCCC 1017912 Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281 ||||| | |||||| || ||||| || |||| | | ||| || | | || |||||| Sbjct 1017913 TGATCGACGTATCTGGCAGTGTTGTTGAAAACACGGAGCATGGGCACGAGGCCGTTGGAT 1017972 Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT-AGACC 66340 || || ||||| || | || || ||| | |||||||| | | | | | ||||| Sbjct 1017973 GTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACGAAT-GCAGTGAGCGTTGAGACC 1018031 Query 66341 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 66400 || || ||||| | || ||||| | ||||| || | || || || ||||| || Sbjct 1018032 AATGCCACCTGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAAATGCCATC 1018091 Query 66401 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 66460 || || ||| |||| | || | || || || | ||| | || |||||| Sbjct 1018092 AATTGAGTCGTCCTTCATATCAATCAAGAAGCATGAAGCGAGTTGAGGCTGAGGAGTTCC 1018151 Query 66461 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 66520 ||| | || | ||| || || ||||| || || | || || | || ||||| || Sbjct 1018152 GGCACTGAAGAGGGTGGGCGAGGCGTGAGTGAAGTACTTGAGTGACATAAGGTTGTATGT 1018211 Query 66521 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 66580 |||||| || | || |||||| ||| || || || ||||||||||| | ||| || Sbjct 1018212 CTCAATGGCAGCCTCGATATCCTCGCCATGGATACCAACAGCGACACGCATGATCATCTG 1018271 Query 66581 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 66640 ||| ||||| || ||| |||| | | | | | | || || ||||||||| || Sbjct 1018272 CTGGGGTCTCTCGGCGACCTTGCCCTCGAGTCTGAGGAGATATGAACGTTCCAAAGTCTT 1018331 Query 66641 AAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694 ||||| || || | ||| ||||| |||| ||||| | || | |||||||| Sbjct 1018332 GAAACCGAAGTACTGGTAGTTGAAA--TCTCTGTCGTAGACGATGGCTGAGTTGAG 1018385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172454459280