Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq40 179 5e-40 seq5 125 1e-23 >seq40 Length=1419383 Score = 179 bits (198), Expect = 5e-40 Identities = 472/716 (66%), Gaps = 6/716 (1%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||||||||| || | || ||| | || ||||||||||| || ||||||| | | Sbjct 1017673 TCGAACTCGTCGCCGTACACGTCGGCCAAACCAGGACATTCACTGGGGCACATCAGAGTC 1017732 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || | | || || || ||||| ||||||||||| ||||| ||||| || Sbjct 1017733 CAGGTGGAGTTCTGCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAAG 1017792 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 ||||| | || | | ||||| || || ||||| ||||||||||| || | Sbjct 1017793 AGATCGCGGGCACGAACTTCCTCCTTACCATGGTTCTTGCGGAGATCGAGGAAGGCGAAG 1017852 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 | || | ||||| || || | ||| ||||| | | || || || ||||| || ||| Sbjct 1017853 ACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCGCCC 1017912 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 ||||| | |||||| || ||||| || |||| | | ||| || | | || |||||| Sbjct 1017913 TGATCGACGTATCTGGCAGTGTTGTTGAAAACACGGAGCATGGGCACGAGGCCGTTGGAT 1017972 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 80219 || || ||||| || | || || ||| |||||||||| | | | | | ||||| Sbjct 1017973 GTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACGAAT-GCAGTGAGCGTTGAGACC 1018031 Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 80279 || || ||||| | || ||||| | ||||| || | || || || ||||| || Sbjct 1018032 AATGCCACCTGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAAATGCCATC 1018091 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 80339 || || || |||| | || | || || || | ||| | || |||||| Sbjct 1018092 AATTGAGTCGTCCTTCATATCAATCAAGAAGCATGAAGCGAGTTGAGGCTGAGGAGTTCC 1018151 Query 80340 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 80399 ||| | || | ||| || || ||||| || || | || |||| || ||||| || Sbjct 1018152 GGCACTGAAGAGGGTGGGCGAGGCGTGAGTGAAGTACTTGAGTGACATAAGGTTGTATGT 1018211 Query 80400 CTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTG 80459 |||||| || | || |||||| ||| || || || ||||||||||| | ||| || Sbjct 1018212 CTCAATGGCAGCCTCGATATCCTCGCCATGGATACCAACAGCGACACGCATGATCATCTG 1018271 Query 80460 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTT 80519 ||| ||||| || ||| |||| | | | | | | || || ||||||||| || Sbjct 1018272 CTGGGGTCTCTCGGCGACCTTGCCCTCGAGTCTGAGGAGATATGAACGTTCCAAAGTCTT 1018331 Query 80520 AAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 ||||| || || | ||| ||||| |||| ||||| | || | |||||||| Sbjct 1018332 GAAACCGAAGTACTGGTAGTTGAAA--TCTCTGTCGTAGACGATGGCTGAGTTGAG 1018385 >seq5 Length=936409 Score = 125 bits (138), Expect = 1e-23 Identities = 359/546 (66%), Gaps = 12/546 (2%) Strand=Plus/Minus Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033 ||||| ||||||||| | || || |||||||| || || || || ||||| || || Sbjct 248354 GTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCATGAGACC 248295 Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093 |||||| || ||||| || ||||| || || || || || |||||||| || || || || Sbjct 248294 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCCGAGAAGAAGATACCCTCGACAGC 248235 Query 50094 GGCAAAGGC-AACAAGTCTCTCTCCATAACT---GGCGCTGTCATGTATCCACTTTTGAG 50149 ||||||||| | |||| | ||| | | | | |||| |||||||| | | Sbjct 248234 GGCAAAGGCGATCAAG-CGGCAGCCAAAGGTCGAGTCCTTGTCGCAGATCCACTTGAGGG 248176 Query 50150 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 50209 |||| |||||||| | || | ||||| || | || ||||| || ||||| ||| | Sbjct 248175 CCCAGTCGGCCTTTCTCTTGATGCAAGGAATGTTCTCAATGGCGTTGAAGAGGTAGGTAC 248116 Query 50210 tttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCGAATGAAT 50267 | ||| || | | || || ||||| | || || || | || || ||||| Sbjct 248115 GCTGCTTAGGTTCGCTGATGTATGTGTCGATGAGCAATGA--GTAGGTCTCGGAGTGAAT 248058 Query 50268 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGT 50327 ||| || || ||||| || |||||||| ||||| ||||| | ||||| || || | Sbjct 248057 GTTCTCCATCATGATCTGGAAACCGTAGAAGCATCTGGCCTCAGGGATCTGGACCTCGGA 247998 Query 50328 ACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 50387 | || || || | | || || || || || |||||| ||| || || || || | Sbjct 247997 GCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCGTCAGAGGCAGCGAAGAAAGCGAG 247938 Query 50388 TACATG---TTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATC 50444 || || | | ||| | | |||| | || | ||||| || | | || Sbjct 247937 GACGTGAGAGATGAAGAAACGCTCGTCGTCGTTGAGGCGTCTGTTCCAGTCGTGAAGGTC 247878 Query 50445 TTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 50504 || || | ||| | || || | ||||| || || || || ||||| || ||||| || Sbjct 247877 CTTGGAAAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCTTCGGCCTTCTTGTACATGTT 247818 Query 50505 CCAGAT 50510 |||||| Sbjct 247817 CCAGAT 247812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268422908880