Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq40 174 2e-38
>seq40
Length=1419383
Score = 174 bits (192), Expect = 2e-38
Identities = 471/717 (66%), Gaps = 8/717 (1%)
Strand=Plus/Plus
Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003
||||||||||| || | | | | | || |||||||||||| | || ||||||| | |
Sbjct 1017673 TCGAACTCGTCGCCGTACACGTCGGCCAAACCAGGACATTCACTGGGGCACATCAGAGTC 1017732
Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063
|| | | | || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 1017733 CAGGTGGAGTTCTGCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAAG 1017792
Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123
||||| | || | | ||||| || || ||||| ||||||||||| || |
Sbjct 1017793 AGATCGCGGGCACGAACTTCCTCCTTACCATGGTTCTTGCGGAGATCGAGGAAGGCGAAG 1017852
Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183
| || | ||||| || || | ||| ||||| | | || || || ||||| || |||
Sbjct 1017853 ACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCGCCC 1017912
Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243
||||| | |||||| || ||||| || |||| | | ||| || | | || ||||||
Sbjct 1017913 TGATCGACGTATCTGGCAGTGTTGTTGAAAACACGGAGCATGGGCACGAGGCCGTTGGAT 1017972
Query 72244 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGAC 72301
| || ||||| || | || || ||| |||||||||| | || ||| ||||
Sbjct 1017973 GTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACGAATGCAGTGAGCGTTG--AGAC 1018030
Query 72302 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 72361
| || || ||||| | || ||||| | ||||| || | || || || ||||| |
Sbjct 1018031 CAATGCCACCTGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAAATGCCAT 1018090
Query 72362 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 72421
| || || ||| |||| | || | || || || | ||| | || |||||
Sbjct 1018091 CAATTGAGTCGTCCTTCATATCAATCAAGAAGCATGAAGCGAGTTGAGGCTGAGGAGTTC 1018150
Query 72422 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 72481
| ||| | || | ||| || || ||||| || || | || |||| || ||||| |
Sbjct 1018151 CGGCACTGAAGAGGGTGGGCGAGGCGTGAGTGAAGTACTTGAGTGACATAAGGTTGTATG 1018210
Query 72482 TCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATAT 72541
||||||| || | || |||||| ||| || || || ||||||||||| | ||| |
Sbjct 1018211 TCTCAATGGCAGCCTCGATATCCTCGCCATGGATACCAACAGCGACACGCATGATCATCT 1018270
Query 72542 GCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 72601
|||| ||||| || ||| |||| | | | | | | || || ||||||||| |
Sbjct 1018271 GCTGGGGTCTCTCGGCGACCTTGCCCTCGAGTCTGAGGAGATATGAACGTTCCAAAGTCT 1018330
Query 72602 TAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656
| ||||| || || | ||| ||||| |||| ||||| | || | || |||||
Sbjct 1018331 TGAAACCGAAGTACTGGTAGTTGAAA--TCTCTGTCGTAGACGATGGCTGAGTTGAG 1018385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138847651920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |