Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq5 190 3e-43 seq40 131 2e-25 >seq5 Length=936409 Score = 190 bits (210), Expect = 3e-43 Identities = 560/847 (66%), Gaps = 27/847 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| | ||||| || ||||| | ||| ||| | ||||| Sbjct 247812 ATCTGGAACATGTACAAGAAGGCCGAAGCCTCTTTCTGGACCGCCGAGGAGATTGATCTT 247871 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| |||| ||| | | || | | || ||||| || || || Sbjct 247872 TCCAAGGACCTTCACGACTGGAACAGACGCCTCAACGACGACGAGCGTTTCTTCATCTCT 247931 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | || ||||| || | ||| || || ||||||||||| || || || || || Sbjct 247932 CACGTCCTCGCTTTCTTCGCTGCCTCTGACGGTATCGTCAACGAGAACCTCGTCGA-GCG 247990 Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 ||| ||| ||| | || || |||| ||||| ||||| ||||| ||||||| Sbjct 247991 TTTCAGCTC-CGAGGTCCAGATCCCTGAGGCCAGATGCTTCTACGGTTTCCAGATCATGA 248049 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314 | |||||| | ||||| || | ||||| || || |||| ||||| |||| || Sbjct 248050 TGGAGAACATTCACTCCGAGACCTACTCATTGCTCATCGACACATACATCAGCGAACCTA 248109 Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 ||| |||| || ||||| ||||| || || | | || | || | ||||| Sbjct 248110 AGCAGCGTACCTAC---CTCTTCAACGCCATTGAGAACATTCCTTGCATCAAGAGAAAGG 248166 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAG---TCTTCGTACGCCGACAGACTGG 125430 | | |||| | ||||||| || ||||||| || | | | | | | || Sbjct 248167 CCGACTGGGCCCTCAAGTGGATC--TG-CGACAAGGACTCGACCTTTGGCTGCCGCTTGA 248223 Query 125431 TGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGC 125490 | || || ||||| || ||||| |||||||| |||||| || || ||||||| |||| Sbjct 248224 TCGCCTTTGCCGCTGTCGAGGGTATCTTCTTCTCGGGTTCCTTCGCTTCCATCTTCTGGC 248283 Query 125491 TCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACG 125550 |||||||||| || |||||||| || || || | |||||| | || || || |||| Sbjct 248284 TCAAGAAGCGTGGTCTCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCGCGTGACG 248343 Query 125551 AGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCA 125610 |||| | ||| |||||||||| | | ||| | | ||| | | | || || Sbjct 248344 AGGGTATGCACACTGACTTTGCC-TGC--CTG---CTCCACT---CACACCTCAAGAACA 248394 Query 125611 GATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGT 125670 || | ||| ||| | || | ||||| ||||| || || || |||| Sbjct 248395 AGCCCTCTGCTGAGCTCGTCCGTGAGATCATCACCGAGGCCGTCGCCATCGAGCAGGAGT 248454 Query 125671 TTCTAACCGAATCCCTACCGGTCAGC-ATGATTGGCATGAACTGCAAGCTAATGTGCGAG 125729 | || | || |||| || || || | | ||||||||| ||||| |||||| | Sbjct 248455 TCCTGTCAGATGCCCT-CCCGTGTGCTCTCCTCGGCATGAACGCAAAGCTCATGTGCCAA 248513 Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAAC 125789 ||||| ||||| || || || ||||| || || | | | |||||| ||| | Sbjct 248514 TACATCGAGTTCGTTGCCGACCGTCTGCTCCTCGCCCTCGGCGAACCCAAGATCTACCAA 248573 Query 125790 GCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTC 125849 |||| || ||||| || |||||| | ||| || || | || ||||||||||| ||| Sbjct 248574 GCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCTGGCAAGACCAACTTCTTC 248633 Query 125850 GAGAAGA 125856 ||||||| Sbjct 248634 GAGAAGA 248640 >seq40 Length=1419383 Score = 131 bits (144), Expect = 2e-25 Identities = 356/534 (67%), Gaps = 12/534 (2%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 || ||||||| ||| ||||| ||||| |||||| | | | ||| || || || | Sbjct 1017983 ACCAACGGCACATCCAACGGCCTCGTGCCCATGCTCCGTGTTTTCAACAACACTGCCA-G 1017925 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 |||||| ||||||||||| || || || || || | ||| ||||| | || || || Sbjct 1017924 ATACGTCGATCAGGGCGGCAACAAGCGTCCTGGTGCATTCGCCATCTACCTCGAGCCCTG 1017865 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 |||||| ||||| || | ||| |||| | ||||| ||| ||| || || | || Sbjct 1017864 GCACGCCGACGTCTTCGCCTTCCTCGATCTCCGCAAGAACCATGGTAAGGAGGAAGTTCG 1017805 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045 ||| | || | || || || |||||| | || ||| | ||||||||||| ||| | | Sbjct 1017804 TGCCCGCGATCTCTTCTACGCTCTCTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGCA 1017745 Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCC---GACTCGTCACCCGGTCTGTCCGATTGCTG 97102 | ||||| || ||||||||| || | || || ||| || |||| | Sbjct 1017744 GAACTCCACCTGGACTCTGATGTGCCCCAGTGAAT-GT--CCTGGTTTGGCCGACGTGTA 1017688 Query 97103 GGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGAC 97161 ||||| ||||| |||| |||| | ||||||| || ||||| || || || Sbjct 1017687 CGGCGACGAGTTCGAGGTTCTGTACGAGAAGTACGAGCGCGAAGGCCGTGGTCGCGACAC 1017628 Query 97162 GAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACT 97220 | || || | |||| |||||| | || ||| | ||||||| ||||| || | Sbjct 1017627 CA-TCCGCGC-CCAGAAGCTGTGGTACGCTATCCTCGAGGCTCAGACCGAGACCGGTAAC 1017570 Query 97221 CCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACC 97280 || | ||| || ||||||||| || || ||||| |||||||| || | || | Sbjct 1017569 CCCTTCATGCTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTGTC 1017510 Query 97281 ATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 || ||||||| |||||||| ||||| | |||||| | |||| || ||| Sbjct 1017509 ATTCGCAGCTCCAACCTGTGCACTGAAATCATCGAGTACACTGCTCCTGATGAG 1017456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058810943920