Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq41 159 5e-35
seq42 113 7e-21
>seq41
Length=1328401
Score = 159 bits (176), Expect = 5e-35
Identities = 185/247 (75%), Gaps = 2/247 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| | | || || |||||||| || ||||| ||||| |||||
Sbjct 208866 GCCAAGCGTCACCGCAAGATTT-TGCGCGACAACATCCAGGGTATCACAAAGCCCGCTAT 208924
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| |||||||||||||| ||||| ||| |||| | || |||| || ||||
Sbjct 208925 CCGCCGTCTCGCTCGTCGTGGTGGTGTCAAACGTATCTCAGCCATGATCTACGAGGAGAC 208984
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | |||| ||||||| || ||||||| || || || ||| || ||
Sbjct 208985 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTTATCCGCGACGCCGTCACCTACACTGA 209044
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| |||||||| | || | ||||| || | || || || ||
Sbjct 209045 GCACGCCAAGCGCAAGACCGTCACCTCTCTCGACGTTGTCTACGCTCTCAAGCGCCAGGG 209104
Query 16672 CCGTAAG 16678
|||| ||
Sbjct 209105 CCGTGAG 209111
>seq42
Length=1255954
Score = 113 bits (124), Expect = 7e-21
Identities = 87/101 (86%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||||| | || || |||||||| || ||||||||||| |||||
Sbjct 781472 GCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCTAT 781414
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 781413 CCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 781373
Score = 93.3 bits (102), Expect = 7e-15
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| |||| ||| | |||| ||||||| || ||||||| ||| |
Sbjct 781314 TGATCTACGAAGAGACCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTTATCCGTGACG 781255
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
|| | ||| ||||||||||| || || ||||| ||||||||| | || ||||||| |
Sbjct 781254 CTGTTACCTACACCGAGCACGCAAAGCGCAAGACCGTCACCTCCCTTGACGTCGTCTACG 781195
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || || || ||| | | | || ||||| || |||||
Sbjct 781194 CCCTCAAGCGCCAGGGCAGAACCCTCTACGGTTTCGGTGGTTAA 781151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075161599106
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |