Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq40 192 7e-44 seq5 134 2e-26 >seq40 Length=1419383 Score = 192 bits (212), Expect = 7e-44 Identities = 475/716 (66%), Gaps = 6/716 (1%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 ||||||||||| || | || | | |||| |||||||||||| || ||||||| | | Sbjct 1017673 TCGAACTCGTCGCCGTACACGTCGGCCAAACCAGGACATTCACTGGGGCACATCAGAGTC 1017732 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || || | || || || ||||| ||||||||||| ||||| ||||| || Sbjct 1017733 CAGGTGGAGTTCTGCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAAG 1017792 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 ||||| | || | | |||||| || || ||||| ||||||||||| || | Sbjct 1017793 AGATCGCGGGCACGAACTTCCTCCTTACCATGGTTCTTGCGGAGATCGAGGAAGGCGAAG 1017852 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | || | ||||| || || | ||| ||||| | | ||||| || ||||| || ||| Sbjct 1017853 ACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCGCCC 1017912 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 ||||| | |||||| || ||||| || |||| | | ||| || | | ||||| ||| Sbjct 1017913 TGATCGACGTATCTGGCAGTGTTGTTGAAAACACGGAGCATGGGCACGAGGCCGTTGGAT 1017972 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 63496 | || |||||||| | || || ||| |||||||||| | | | | | ||||| Sbjct 1017973 GTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACGAAT-GCAGTGAGCGTTGAGACC 1018031 Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556 || || ||||| | || ||||| | ||||| || | ||||| || || || || Sbjct 1018032 AATGCCACCTGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAAATGCCATC 1018091 Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63616 || || || |||| | || | || || || | ||| | || |||||| Sbjct 1018092 AATTGAGTCGTCCTTCATATCAATCAAGAAGCATGAAGCGAGTTGAGGCTGAGGAGTTCC 1018151 Query 63617 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63676 ||| | || | ||| || || ||||| || || | || || | || ||||| || Sbjct 1018152 GGCACTGAAGAGGGTGGGCGAGGCGTGAGTGAAGTACTTGAGTGACATAAGGTTGTATGT 1018211 Query 63677 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63736 |||||| || | || |||||| ||| || || || ||||||||||| | ||| || Sbjct 1018212 CTCAATGGCAGCCTCGATATCCTCGCCATGGATACCAACAGCGACACGCATGATCATCTG 1018271 Query 63737 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 63796 ||| ||||| || ||| |||| | | | | | | || || ||||||||| || Sbjct 1018272 CTGGGGTCTCTCGGCGACCTTGCCCTCGAGTCTGAGGAGATATGAACGTTCCAAAGTCTT 1018331 Query 63797 AAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850 ||||| || || | ||| ||||| |||| ||||| | || | |||||||| Sbjct 1018332 GAAACCGAAGTACTGGTAGTTGAAA--TCTCTGTCGTAGACGATGGCTGAGTTGAG 1018385 >seq5 Length=936409 Score = 134 bits (148), Expect = 2e-26 Identities = 360/546 (66%), Gaps = 12/546 (2%) Strand=Plus/Minus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||||| ||||||||| | || || |||||||| || || || || ||||| || || Sbjct 248354 GTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCATGAGACC 248295 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 |||||| || ||||| || ||||||||||| || || || |||||||| || || || || Sbjct 248294 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCCGAGAAGAAGATACCCTCGACAGC 248235 Query 33438 AGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTGAGC 33494 |||||||| || | | ||| | | | |||| |||||||| | || Sbjct 248234 GGCAAAGGCGATCAAGCGGCAGCCAAAGGTCGAGTCCTTGTCGCAGATCCACTTGAGGGC 248175 Query 33495 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 33554 ||| |||||||| | || | ||||| || | || ||||| || ||||| ||| | Sbjct 248174 CCAGTCGGCCTTTCTCTTGATGCAAGGAATGTTCTCAATGGCGTTGAAGAGGTAGGTACG 248115 Query 33555 ttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCGAATGAATG 33612 | ||| || | | || || ||||| | || || || | || || |||||| Sbjct 248114 CTGCTTAGGTTCGCTGATGTATGTGTCGATGAGCAATGA--GTAGGTCTCGGAGTGAATG 248057 Query 33613 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTA 33672 || || || ||||| || |||||||| ||||| ||||| | ||||| || || | Sbjct 248056 TTCTCCATCATGATCTGGAAACCGTAGAAGCATCTGGCCTCAGGGATCTGGACCTCGGAG 247997 Query 33673 CAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 33732 | || || || | | || || || || || |||||| ||| || || || || | Sbjct 247996 CTGAAACGCTCGACGAGGTTCTCGTTGACGATACCGTCAGAGGCAGCGAAGAAAGCGAGG 247937 Query 33733 ACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTCCAATCATTGATATC 33788 || || || || | ||||| | ||| || | ||||| || | | || Sbjct 247936 ACGTGAGAGATGAAGAAACGCTCGTC-GTCGTTGAGGCGTCTGTTCCAGTCGTGAAGGTC 247878 Query 33789 TTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTT 33848 || || | ||| | || || | ||||| || || || || ||||| || |||||||| Sbjct 247877 CTTGGAAAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCTTCGGCCTTCTTGTACATGTT 247818 Query 33849 CCAGAT 33854 |||||| Sbjct 247817 CCAGAT 247812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946872952720