Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq40 192 7e-44
seq5 134 2e-26
>seq40
Length=1419383
Score = 192 bits (212), Expect = 7e-44
Identities = 475/716 (66%), Gaps = 6/716 (1%)
Strand=Plus/Plus
Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197
||||||||||| || | || | | |||| |||||||||||| || ||||||| | |
Sbjct 1017673 TCGAACTCGTCGCCGTACACGTCGGCCAAACCAGGACATTCACTGGGGCACATCAGAGTC 1017732
Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257
|| || | || || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 1017733 CAGGTGGAGTTCTGCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAAG 1017792
Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317
||||| | || | | |||||| || || ||||| ||||||||||| || |
Sbjct 1017793 AGATCGCGGGCACGAACTTCCTCCTTACCATGGTTCTTGCGGAGATCGAGGAAGGCGAAG 1017852
Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377
| || | ||||| || || | ||| ||||| | | ||||| || ||||| || |||
Sbjct 1017853 ACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCGCCC 1017912
Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437
||||| | |||||| || ||||| || |||| | | ||| || | | ||||| |||
Sbjct 1017913 TGATCGACGTATCTGGCAGTGTTGTTGAAAACACGGAGCATGGGCACGAGGCCGTTGGAT 1017972
Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 63496
| || |||||||| | || || ||| |||||||||| | | | | | |||||
Sbjct 1017973 GTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACGAAT-GCAGTGAGCGTTGAGACC 1018031
Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTC 63556
|| || ||||| | || ||||| | ||||| || | ||||| || || || ||
Sbjct 1018032 AATGCCACCTGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAAATGCCATC 1018091
Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 63616
|| || || |||| | || | || || || | ||| | || ||||||
Sbjct 1018092 AATTGAGTCGTCCTTCATATCAATCAAGAAGCATGAAGCGAGTTGAGGCTGAGGAGTTCC 1018151
Query 63617 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 63676
||| | || | ||| || || ||||| || || | || || | || ||||| ||
Sbjct 1018152 GGCACTGAAGAGGGTGGGCGAGGCGTGAGTGAAGTACTTGAGTGACATAAGGTTGTATGT 1018211
Query 63677 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63736
|||||| || | || |||||| ||| || || || ||||||||||| | ||| ||
Sbjct 1018212 CTCAATGGCAGCCTCGATATCCTCGCCATGGATACCAACAGCGACACGCATGATCATCTG 1018271
Query 63737 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 63796
||| ||||| || ||| |||| | | | | | | || || ||||||||| ||
Sbjct 1018272 CTGGGGTCTCTCGGCGACCTTGCCCTCGAGTCTGAGGAGATATGAACGTTCCAAAGTCTT 1018331
Query 63797 AAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850
||||| || || | ||| ||||| |||| ||||| | || | ||||||||
Sbjct 1018332 GAAACCGAAGTACTGGTAGTTGAAA--TCTCTGTCGTAGACGATGGCTGAGTTGAG 1018385
>seq5
Length=936409
Score = 134 bits (148), Expect = 2e-26
Identities = 360/546 (66%), Gaps = 12/546 (2%)
Strand=Plus/Minus
Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377
||||| ||||||||| | || || |||||||| || || || || ||||| || ||
Sbjct 248354 GTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCATGAGACC 248295
Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437
|||||| || ||||| || ||||||||||| || || || |||||||| || || || ||
Sbjct 248294 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCCGAGAAGAAGATACCCTCGACAGC 248235
Query 33438 AGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTGAGC 33494
|||||||| || | | ||| | | | |||| |||||||| | ||
Sbjct 248234 GGCAAAGGCGATCAAGCGGCAGCCAAAGGTCGAGTCCTTGTCGCAGATCCACTTGAGGGC 248175
Query 33495 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 33554
||| |||||||| | || | ||||| || | || ||||| || ||||| ||| |
Sbjct 248174 CCAGTCGGCCTTTCTCTTGATGCAAGGAATGTTCTCAATGGCGTTGAAGAGGTAGGTACG 248115
Query 33555 ttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATACATTTCCGAATGAATG 33612
| ||| || | | || || ||||| | || || || | || || ||||||
Sbjct 248114 CTGCTTAGGTTCGCTGATGTATGTGTCGATGAGCAATGA--GTAGGTCTCGGAGTGAATG 248057
Query 33613 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTA 33672
|| || || ||||| || |||||||| ||||| ||||| | ||||| || || |
Sbjct 248056 TTCTCCATCATGATCTGGAAACCGTAGAAGCATCTGGCCTCAGGGATCTGGACCTCGGAG 247997
Query 33673 CAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 33732
| || || || | | || || || || || |||||| ||| || || || || |
Sbjct 247996 CTGAAACGCTCGACGAGGTTCTCGTTGACGATACCGTCAGAGGCAGCGAAGAAAGCGAGG 247937
Query 33733 ACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTCCAATCATTGATATC 33788
|| || || || | ||||| | ||| || | ||||| || | | ||
Sbjct 247936 ACGTGAGAGATGAAGAAACGCTCGTC-GTCGTTGAGGCGTCTGTTCCAGTCGTGAAGGTC 247878
Query 33789 TTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTT 33848
|| || | ||| | || || | ||||| || || || || ||||| || ||||||||
Sbjct 247877 CTTGGAAAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCTTCGGCCTTCTTGTACATGTT 247818
Query 33849 CCAGAT 33854
||||||
Sbjct 247817 CCAGAT 247812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946872952720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |