Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq5 136 4e-27
seq40 118 1e-21
seq39 105 6e-18
seq21 86.0 6e-12
>seq5
Length=936409
Score = 136 bits (150), Expect = 4e-27
Identities = 330/493 (67%), Gaps = 9/493 (2%)
Strand=Plus/Plus
Query 46106 CCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGG 46165
|||||||||| | ||||||||| | || | |||| || | | || || | |
Sbjct 248167 CCGACTGGGCCCTCAAGTGGATCTGCGACAAGGACTCGACCTTTGGCTGCCGCTTGATCG 248226
Query 46166 CCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCA 46225
||||||| ||| ||||| |||| || || || || || ||||||| | |||
Sbjct 248227 CCTTTGCCGCTGTCGAGGGTATCTTCTTCTCGGGTTCCTTCGCTTCCATCTTCTGGCTCA 248286
Query 46226 A-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAG 46284
| || | || | ||||||| || || || || ||||||||| || ||||| ||||||
Sbjct 248287 AGAAGCGTGGTC-TCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCGCGTGACGAG 248345
Query 46285 GGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACACTCGCGTGCACGACAAGCTTGC 46343
|| |||| || |||||||| || || || | | |||| | | |||||| |
Sbjct 248346 GGTATGCACACTGACTTTGCCTGCCTGCTCCACTCACACC----TCAAGAACAAGCCCTC 248401
Query 46344 GCCCGACACCGTGC-TGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTA 46402
| || ||| | |||| || ||| ||||| || ||||| ||| ||||||| |
Sbjct 248402 TGCTGAGCTCGTCCGTGAG-ATCATCACCGAGGCCGTCGCCATCGAGCAGGAGTTCCTGT 248460
Query 46403 CGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCG 46462
| | || || || ||| || || |||||||||||| || |||||| | |||||||
Sbjct 248461 CAGATGCCCTCCCGTGTGCTCTCCTCGGCATGAACGCAAAGCTCATGTGCCAATACATCG 248520
Query 46463 AGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCGCGCA 46522
|||| || || ||||| |||||| | || | | || ||| | || || ||
Sbjct 248521 AGTTCGTTGCCGACCGTCTGCTCCTCGCCCTCGGCGAACCCAAGATCTACCAAGCCACCA 248580
Query 46523 ATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGC 46582
| || || || || ||| | |||||||| |||| ||||| || || || ||||| |||
Sbjct 248581 ACCCCTTCGACTTCATGGAGAACATCTCGCTGGCTGGCAAGACCAACTTCTTCGAGAAGA 248640
Query 46583 GCGTCGGCGAGTA 46595
| || || || ||
Sbjct 248641 GAGTTGGTGACTA 248653
>seq40
Length=1419383
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || | || | ||||||||||| ||||||||||| ||||||
Sbjct 110816 CCACCACGCAGACGAAGGACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTC 110875
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||| || || |||||||| ||| |||| | ||||||||| ||||||||
Sbjct 110876 AGGGTACGACCGTCTTCGAGTTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGAGGA 110935
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || |||||||| ||| || ||||| | || | ||| || | ||||| |
Sbjct 110936 ATGCCCTCTTTGTCCTGGATCTTGCTCTTGACGTTGTCGATAGTGTCAGAAGACTCAACC 110995
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|| | || | ||| || |||||
Sbjct 110996 TCAAGAGTGATGGTCTTGCCGGT 111018
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | || || ||||| || |||||||| |||
Sbjct 110588 CCACCACGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAG 110647
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| || |||| | ||||| ||||| || ||
Sbjct 110648 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGA 110707
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||||| | || | || |||| |||||||
Sbjct 110708 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCGACC 110767
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| ||| || || || || || || ||||||||||||||
Sbjct 110768 TCAAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 110814
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| |||||||| || |||||||| || | || || ||||| | |||||| ||
Sbjct 110390 GTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGGCCATCCTCCAACTGCTTTCCG 110449
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| |||| | ||||||||||| || ||||| || || ||||| ||| || ||||
Sbjct 110450 GCGAAGATGAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCTTGGATCTTTGACTTG 110509
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || |||| || || | |||| || | ||| || ||||| |||||
Sbjct 110510 ACGTTGTCGATTGTGTCGGATGATTCAACTTCGAGTGTGATGGTCTTGCCGGTCAGAGTC 110569
Query 131218 TTTACGAAAATCTGCAT 131234
|| ||||| ||||||||
Sbjct 110570 TTGACGAAGATCTGCAT 110586
>seq39
Length=1607033
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | ||||||||||| || |||||||| |||
Sbjct 1034983 CCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 1034924
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| |||||||| || ||| |||| | |||||||||||||| ||
Sbjct 1034923 AGAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 1034864
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||||||
Sbjct 1034863 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 1034804
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAA 131225
|| | ||| | ||| || || || || || || |||||
Sbjct 1034803 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 1034766
>seq21
Length=2295224
Score = 86.0 bits (94), Expect = 6e-12
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102
|||||| || |||||||| ||| | |||||| ||||| ||||||||||| ||| |
Sbjct 1877160 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 1877219
Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGT 131144
||| | |||||||||||||| ||||| || || ||||| ||
Sbjct 1877220 GATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCTGT 1877261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012552193280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |