Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq5 136 4e-27 seq40 118 1e-21 seq39 105 6e-18 seq21 86.0 6e-12 >seq5 Length=936409 Score = 136 bits (150), Expect = 4e-27 Identities = 330/493 (67%), Gaps = 9/493 (2%) Strand=Plus/Plus Query 46106 CCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGG 46165 |||||||||| | ||||||||| | || | |||| || | | || || | | Sbjct 248167 CCGACTGGGCCCTCAAGTGGATCTGCGACAAGGACTCGACCTTTGGCTGCCGCTTGATCG 248226 Query 46166 CCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCA 46225 ||||||| ||| ||||| |||| || || || || || ||||||| | ||| Sbjct 248227 CCTTTGCCGCTGTCGAGGGTATCTTCTTCTCGGGTTCCTTCGCTTCCATCTTCTGGCTCA 248286 Query 46226 A-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAG 46284 | || | || | ||||||| || || || || ||||||||| || ||||| |||||| Sbjct 248287 AGAAGCGTGGTC-TCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCGCGTGACGAG 248345 Query 46285 GGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACACTCGCGTGCACGACAAGCTTGC 46343 || |||| || |||||||| || || || | | |||| | | |||||| | Sbjct 248346 GGTATGCACACTGACTTTGCCTGCCTGCTCCACTCACACC----TCAAGAACAAGCCCTC 248401 Query 46344 GCCCGACACCGTGC-TGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTA 46402 | || ||| | |||| || ||| ||||| || ||||| ||| ||||||| | Sbjct 248402 TGCTGAGCTCGTCCGTGAG-ATCATCACCGAGGCCGTCGCCATCGAGCAGGAGTTCCTGT 248460 Query 46403 CGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCG 46462 | | || || || ||| || || |||||||||||| || |||||| | ||||||| Sbjct 248461 CAGATGCCCTCCCGTGTGCTCTCCTCGGCATGAACGCAAAGCTCATGTGCCAATACATCG 248520 Query 46463 AGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCGCGCA 46522 |||| || || ||||| |||||| | || | | || ||| | || || || Sbjct 248521 AGTTCGTTGCCGACCGTCTGCTCCTCGCCCTCGGCGAACCCAAGATCTACCAAGCCACCA 248580 Query 46523 ATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGC 46582 | || || || || ||| | |||||||| |||| ||||| || || || ||||| ||| Sbjct 248581 ACCCCTTCGACTTCATGGAGAACATCTCGCTGGCTGGCAAGACCAACTTCTTCGAGAAGA 248640 Query 46583 GCGTCGGCGAGTA 46595 | || || || || Sbjct 248641 GAGTTGGTGACTA 248653 >seq40 Length=1419383 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||||||||||| ||||||||||| |||||| Sbjct 110816 CCACCACGCAGACGAAGGACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTC 110875 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || || |||||||| ||| |||| | ||||||||| |||||||| Sbjct 110876 AGGGTACGACCGTCTTCGAGTTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGAGGA 110935 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| ||| || ||||| | || | ||| || | ||||| | Sbjct 110936 ATGCCCTCTTTGTCCTGGATCTTGCTCTTGACGTTGTCGATAGTGTCAGAAGACTCAACC 110995 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | || | ||| || ||||| Sbjct 110996 TCAAGAGTGATGGTCTTGCCGGT 111018 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || || ||||| || |||||||| ||| Sbjct 110588 CCACCACGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAG 110647 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| | ||||| ||||| || || Sbjct 110648 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGA 110707 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || |||| ||||||| Sbjct 110708 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCGACC 110767 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || || || || || || |||||||||||||| Sbjct 110768 TCAAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 110814 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || |||||||| || | || || ||||| | |||||| || Sbjct 110390 GTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGGCCATCCTCCAACTGCTTTCCG 110449 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | ||||||||||| || ||||| || || ||||| ||| || |||| Sbjct 110450 GCGAAGATGAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCTTGGATCTTTGACTTG 110509 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || |||| || || | |||| || | ||| || ||||| ||||| Sbjct 110510 ACGTTGTCGATTGTGTCGGATGATTCAACTTCGAGTGTGATGGTCTTGCCGGTCAGAGTC 110569 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 110570 TTGACGAAGATCTGCAT 110586 >seq39 Length=1607033 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||||||||||| || |||||||| ||| Sbjct 1034983 CCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 1034924 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || ||| |||| | |||||||||||||| || Sbjct 1034923 AGAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 1034864 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| |||||||| Sbjct 1034863 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 1034804 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAA 131225 || | ||| | ||| || || || || || || ||||| Sbjct 1034803 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 1034766 >seq21 Length=2295224 Score = 86.0 bits (94), Expect = 6e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || |||||||| ||| | |||||| ||||| ||||||||||| ||| | Sbjct 1877160 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 1877219 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGT 131144 ||| | |||||||||||||| ||||| || || ||||| || Sbjct 1877220 GATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCTGT 1877261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012552193280