Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq40 104 2e-17 >seq40 Length=1419383 Score = 104 bits (114), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || |||| || | || || |||||||| Sbjct 110814 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATTACTCTTGAGGTCGAGTCGTCC 110755 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| ||||| ||||| || |||| Sbjct 110754 GACACCATCGA--CAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACC 110697 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || ||||| ||||| || | || |||| |||||| | ||| |||| Sbjct 110696 AACAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTCTCCGACTACA 110637 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 | || || || |||||||| || || Sbjct 110636 ACATCCAGAAGGAATCCACACTCCA 110612 Score = 102 bits (112), Expect = 7e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 25021 TGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGC 25080 ||||||| || ||||||| | || || ||||| |||||||||||||| | ||| Sbjct 111020 TGACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCTGACACTATCGACAACGTCAAGA 110961 Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140 || ||| |||||||| || ||||| || || || ||||| |||| || || |||| Sbjct 110960 GCAAGATCCAGGACAAAGAGGGCATTCCTCCGGATCAGCAGCGTCTTATCTTCGCTGGCA 110901 Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200 | ||| | ||||| | ||| || || |||| ||||| ||||| || || || || || | Sbjct 110900 AGCAACTCGAAGACGGTCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCGACTCTTC 110841 Query 25201 A 25201 | Sbjct 110840 A 110840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327778190230