Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq40 104 2e-17
>seq40
Length=1419383
Score = 104 bits (114), Expect = 2e-17
Identities = 147/205 (72%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || |||| || | || || ||||||||
Sbjct 110814 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATTACTCTTGAGGTCGAGTCGTCC 110755
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| || || ||| || ||| ||||| ||||| ||||| || ||||
Sbjct 110754 GACACCATCGA--CAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACC 110697
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
||||||| | || ||||| ||||| || | || |||| |||||| | ||| ||||
Sbjct 110696 AACAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTCTCCGACTACA 110637
Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201
| || || || |||||||| || ||
Sbjct 110636 ACATCCAGAAGGAATCCACACTCCA 110612
Score = 102 bits (112), Expect = 7e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 25021 TGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGC 25080
||||||| || ||||||| | || || ||||| |||||||||||||| | |||
Sbjct 111020 TGACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCTGACACTATCGACAACGTCAAGA 110961
Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140
|| ||| |||||||| || ||||| || || || ||||| |||| || || ||||
Sbjct 110960 GCAAGATCCAGGACAAAGAGGGCATTCCTCCGGATCAGCAGCGTCTTATCTTCGCTGGCA 110901
Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200
| ||| | ||||| | ||| || || |||| ||||| ||||| || || || || || |
Sbjct 110900 AGCAACTCGAAGACGGTCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCGACTCTTC 110841
Query 25201 A 25201
|
Sbjct 110840 A 110840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327778190230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |