Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq5 168 7e-37 >seq5 Length=936409 Score = 168 bits (186), Expect = 7e-37 Identities = 377/560 (67%), Gaps = 7/560 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| |||||||| || || | ||| ||||| || || || | ||| ||| ||| || | Sbjct 248369 GCAGGCAAAGTCAGTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAG 248310 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || || ||||||||||| || || ||||| || ||| || || || Sbjct 248309 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCCGAGAAGAA 248250 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||||| || || || ||||| || | | || | |||| | | | || || Sbjct 248249 GATACCCTCGACAGCGGCAAAGGCGATCAAGCGGCAGCCAAAGGTCGAGTCCTTGTCGCA 248190 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGCGT 93329 |||||| || | ||||| ||||| ||| |||| || ||||| | |||| || || |||| Sbjct 248189 GATCCACTTGAGGGCCCAGTCGGCCTTTCTCTTGATGCAAGG-AATGTTCTCAATGGCGT 248131 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 | || ||||| |||| | | || | |||||||| ||||| | || || || Sbjct 248130 TGAAGAGGTAGGTACGCTGCTTAGGTTCGCTGATGTATGTGTCGATGAGCAATGAGTAGG 248071 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | || || || | |||||||| || ||||| |||||||| ||||| || || | || Sbjct 248070 TCTCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCTGGCCTCAGGGA 248011 Query 93450 TCTGCACTTCTTGAG-AAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 |||| || || ||| || | ||| ||||| || || ||||| ||||| || || || Sbjct 248010 TCTGGACCTC-GGAGCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCGTCAGAGGCA 247952 Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCC 93565 || || ||||| | | || || || ||| || || || | | | | | Sbjct 247951 GCGAAGAAAGCGAGGACGTGAGAGATGAAGAAACGCTCGTCGTCGTTGAGGCGTCTGTTC 247892 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || ||| || || || |||||||| | || ||| | ||||| || || ||||| || Sbjct 247891 CAGTCGTGAAGGTCCTTGGAAAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCTTCGGCC 247832 Query 93626 TTTTTGTACATATCCCATAT 93645 || |||||||| | ||| || Sbjct 247831 TTCTTGTACATGTTCCAGAT 247812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860507648080