Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq40 113 4e-20
seq39 91.5 1e-13
seq21 84.2 2e-11
seq5 84.2 2e-11
>seq40
Length=1419383
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | ||||| || || |||| || ||||| ||| | ||
Sbjct 110586 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACACTCGAAGTTGAATCATCC 110527
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| ||| || ||||||||||||||||| || || || ||
Sbjct 110526 GACACAATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGTATCCCCCCAGACCAG 110467
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || ||||| || ||||| |||||| ||| || |||| || ||||||
Sbjct 110466 CAGCGCCTCATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGCTCTCTGACTACAAC 110407
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || || ||
Sbjct 110406 ATCCAGAAGGAGTCAAC 110390
>seq39
Length=1607033
Score = 91.5 bits (100), Expect = 1e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| || || || |||| ||| | ||| | ||||
Sbjct 1034781 ACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAACGTCAAGTCC 1034840
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| ||||| || || || || || || || || ||||| ||
Sbjct 1034841 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATCTTCGCCGGAAAG 1034900
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | |||||| |||||| | ||||| |||||||| || || || || ||
Sbjct 1034901 CAGCTCGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCGAC 1034953
>seq21
Length=2295224
Score = 84.2 bits (92), Expect = 2e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
||||||||||||||| || || || || || || || || || || ||||| ||| | ||
Sbjct 1877259 AGACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTTGA 1877200
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGA 22409
|||| ||||||| ||||||| |||||||| || || ||
Sbjct 1877199 GGATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGA 1877161
>seq5
Length=936409
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 117060 CGCATGATCGCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATA 117119
||| ||||||| || ||| |||||| || || ||||| || || || ||| ||||
Sbjct 248217 CGCTTGATCGCCTTTGCCGCTGTCGAGGGTATCTTCTTCTCGGGTTCCTTCGCTTCCATC 248276
Query 117120 TTTTTTATCAAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCG 117179
|| | |||||| ||||| ||||| ||||| || || |||||| | || |||
Sbjct 248277 TTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCG 248336
Query 117180 CGTGACGAAGGTTTACACACCGATTTTGCGTGCATG 117215
|||||||| ||| | ||||| || ||||| ||| ||
Sbjct 248337 CGTGACGAGGGTATGCACACTGACTTTGCCTGCCTG 248372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727785151730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |