Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq40 113 4e-20 seq39 91.5 1e-13 seq21 84.2 2e-11 seq5 84.2 2e-11 >seq40 Length=1419383 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || || |||| || ||||| ||| | || Sbjct 110586 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACACTCGAAGTTGAATCATCC 110527 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| ||| || ||||||||||||||||| || || || || Sbjct 110526 GACACAATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGTATCCCCCCAGACCAG 110467 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || ||||| || ||||| |||||| ||| || |||| || |||||| Sbjct 110466 CAGCGCCTCATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGCTCTCTGACTACAAC 110407 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 110406 ATCCAGAAGGAGTCAAC 110390 >seq39 Length=1607033 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || || |||| ||| | ||| | |||| Sbjct 1034781 ACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAACGTCAAGTCC 1034840 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || || || || || || || || ||||| || Sbjct 1034841 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATCTTCGCCGGAAAG 1034900 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| |||||| | ||||| |||||||| || || || || || Sbjct 1034901 CAGCTCGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCGAC 1034953 >seq21 Length=2295224 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 ||||||||||||||| || || || || || || || || || || ||||| ||| | || Sbjct 1877259 AGACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTTGA 1877200 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGA 22409 |||| ||||||| ||||||| |||||||| || || || Sbjct 1877199 GGATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGA 1877161 >seq5 Length=936409 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 117060 CGCATGATCGCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATA 117119 ||| ||||||| || ||| |||||| || || ||||| || || || ||| |||| Sbjct 248217 CGCTTGATCGCCTTTGCCGCTGTCGAGGGTATCTTCTTCTCGGGTTCCTTCGCTTCCATC 248276 Query 117120 TTTTTTATCAAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCG 117179 || | |||||| ||||| ||||| ||||| || || |||||| | || ||| Sbjct 248277 TTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCG 248336 Query 117180 CGTGACGAAGGTTTACACACCGATTTTGCGTGCATG 117215 |||||||| ||| | ||||| || ||||| ||| || Sbjct 248337 CGTGACGAGGGTATGCACACTGACTTTGCCTGCCTG 248372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727785151730