Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq5 150 4e-31
seq7 91.5 3e-13
>seq5
Length=936409
Score = 150 bits (166), Expect = 4e-31
Identities = 276/401 (69%), Gaps = 4/401 (1%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||| ||||| ||||||||||||||||||||| |||
Sbjct 248635 TCGAAGAAGTTGGTCTTGCCAGCCAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 248576
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| | ||| |||||| | ||| || || | || | ||||| || || ||||| |
Sbjct 248575 GCTTGGTAGATCTTGGGTTCGCCGAGGGCGAGGAGCAGACGGTCGGCAACGAACTCGATG 248516
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
|| || | ||| || | | ||||||||| | | | ||| || | || || | | |
Sbjct 248515 TATTGGCACATGAGCTTTGCGTTCATGCCGAGGAGAGCACACGGGAGGGCATCTGACAGG 248456
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC-CAG-AGACA 251800
|| |||| ||| |||| || ||||| | || | || | || ||| |||
Sbjct 248455 AACTCCTGCTCGATGGCGACGGCCTCGGTGATGATCTCACGGAC--GAGCTCAGCAGAGG 248398
Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860
||||||||| || | ||||| || || | |||| | ||||| ||||||||| |
Sbjct 248397 GCTTGTTCTTGAGGTGTGAGTGGAGCAGGCAGGCAAAGTCAGTGTGCATACCCTCGTCAC 248338
Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920
| ||||| ||||||||| | || |||||||| | ||||| ||| |||||||||
Sbjct 248337 GCGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAGA 248278
Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
|||| | ||||| || ||||| | | ||||||||||
Sbjct 248277 AGATGGAAGCGAAGGAACCCGAGAAGAAGATACCCTCGACA 248237
>seq7
Length=745803
Score = 91.5 bits (100), Expect = 3e-13
Identities = 113/152 (74%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||| ||| | ||| || |||||||||| || || |||||||| || |
Sbjct 581362 CCAACTTCGGTCTCGACGCTGAGCTTGTTTCTCACTCTCGTATGCGTGGTCTTTCCGGTG 581303
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
| ||| || || | ||| | | || |||| ||||||| ||| ||| |||||||
Sbjct 581302 GTCAGCGTGTGAAGGTCGTCCTTGCTGCCTGCTCA-TGGCAACGCCCCCACTTGATCGTC 581244
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|||||||||||||||||||| || ||||| ||
Sbjct 581243 CTCGACGAGCCTACCAACTACCTCGACCGTGA 581212
Score = 87.8 bits (96), Expect = 4e-12
Identities = 154/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
||||||||||| ||| |||| ||| | || || |||| ||||| |||| |||
Sbjct 582734 GGTGAGGATCTCTGTAACTGCACATTCAACTTGGCCTACGGTGCCAAGATCTTGCTCAAC 582675
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | ||| | | |||||||| | || || ||||| |||| ||||| || |
Sbjct 582674 CAGACTCACCTTCGCCTGAAGCGTGGTCAGCGTTACGGTCTTCTCGGCCCCAACGGTTCC 582615
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| |||| ||| || ||||| ||||| |||| ||| | | ||| ||||| | |||
Sbjct 582614 GGAAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGGTTG-AGGGTTTCCCCAAGCA 582556
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|||||||| | ||| || || || |||||||| | |||||
Sbjct 582555 GTCTGAGGTCAAGACCGTCTACGTCGAGCACGATCTGGACTC 582514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836246895322
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |