Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq40 179 7e-40 seq39 159 6e-34 seq5 145 1e-29 seq21 84.2 4e-11 >seq40 Length=1419383 Score = 179 bits (198), Expect = 7e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | | |||| ||| || || ||||| || |||||||| || || ||| Sbjct 110360 CCGCCACGAAGTCTGAGCACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGAG 110419 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| |||||||| ||||| | || ||||| || || Sbjct 110420 AGCGTACGGCCATCCTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGG 110479 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||||| ||||||| ||||| ||||| | |||||| ||| Sbjct 110480 ATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATTGTGTCGGATGATTCAACT 110539 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || || || ||||||||||| |||||||| Sbjct 110540 TCGAGTGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 110586 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || ||||| || || |||||||| || |||||| Sbjct 110588 CCACCACGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAG 110647 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | |||||||| || ||| Sbjct 110648 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGA 110707 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| | |||||| ||||||||||| | || || || Sbjct 110708 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCGACC 110767 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || ||||| || || ||||||||||||||||| |||||||| Sbjct 110768 TCAAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 110814 >seq39 Length=1607033 Score = 159 bits (176), Expect = 6e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || ||||| || |||||||| || ||||| Sbjct 1034983 CCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 1034924 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || || | || ||||| || ||| Sbjct 1034923 AGAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 1034864 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 1034863 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 1034804 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || | ||||||||| || ||||| |||||||||||||| Sbjct 1034803 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 1034766 Score = 113 bits (124), Expect = 8e-20 Identities = 253/380 (67%), Gaps = 24/380 (6%) Strand=Plus/Plus Query 173099 AAAATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGGTAAC 173158 || ||||| || ||||||||||||| || || | || || || ||| ||||| ||| Sbjct 1188957 AAGATTGATACCGTTATGCACTTTGCAGCACAATCTCACGTCGATCTCTCCTTCGGAAAC 1189016 Query 173159 TCGCTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTCTCCTGGAATGCGCGAGG 173218 || | || || |||||||||||| || || || | || || ||| || | Sbjct 1189017 TCTTATGACTTCACATACGCCAACGTCTACGGCACTCATGTATTGCTAGAGTGCATGAAG 1189076 Query 173219 CTCTATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACGAAGTATACGGCGAGAGC 173278 ||||| || || ||||||| |||||||||| || || || || || || Sbjct 1189077 ACGTATGGAA---TCAAGAAGTTCATCCATGTGTCTACGGATGAGGTCTATGGTGA---- 1189129 Query 173279 AGTCTGGGCAAAAAAGAAGGCCTCGATGAACA-CTCGTC--------CCTCGAGCCAACA 173329 |||| ||||| || |||||| | |||| ||||| || ||| Sbjct 1189130 AGTC--------AAAGATGGAGCCGATGATCTTCTCGAAGATGCCATCCTCGCCCCTACA 1189181 Query 173330 AACCCATATGCAGCAGCCAAGGCTGGTGCCGAAATGATGGCACGTGCATATCACACATCG 173389 ||||||||||| ||| ||||||||| || || ||||||| || || || ||| Sbjct 1189182 AACCCATATGCCGCATCCAAGGCTGCCGCAGAGATGATGGTACACGCTTACTACAAGAGC 1189241 Query 173390 TACAAGCTACCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCCGCATCAGTTCCCC 173449 | |||||||| |||||| | ||| |||||||||| ||||| || || ||||| ||| Sbjct 1189242 TTTAAGCTACCCGTCATCATCGTCCGCAGCAACAATGTCTATGGTCCTCACCAGTTTCCC 1189301 Query 173450 GAAAAAATGATCCCAAAATT 173469 || || | ||||| || || Sbjct 1189302 GAGAAGGTCATCCCGAAGTT 1189321 >seq5 Length=936409 Score = 145 bits (160), Expect = 1e-29 Identities = 297/440 (68%), Gaps = 6/440 (1%) Strand=Plus/Minus Query 9933 TTCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCC 9992 |||||||| || ||||||||||| || || | |||||||||||||| |||||| Sbjct 248674 TTCATGACACCAGCCTTCTGGTAGTCACCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCA 248615 Query 9993 TCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAA 10052 | || || ||| |||||||||||| |||||||| ||| | |||||| | Sbjct 248614 GCCAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCTTGGTAGATCTTGGGTTCG 248555 Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112 ||||| || || | ||||| || |||||||||||||| |||| ||| || | | | Sbjct 248554 CCGAGGGCGAGGAGCAGACGGTCGGCAACGAACTCGATGTATTGGCACATGAGCTTTGCG 248495 Query 10113 TTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172 |||||||| | | || |||| ||| || | | ||| |||| ||| ||||||| Sbjct 248494 TTCATGCCGAGGAGAGCACACGGGAGGGCATCTGACAGGAACTCCTGCTCGATGGCGACG 248435 Query 10173 GCTTCCTCGACGATGCTCT---TTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAA 10229 | ||||| |||| ||| || | ||| || ||||||||| ||| | || Sbjct 248434 G---CCTCGGTGATGATCTCACGGACGAGCTCAGCAGAGGGCTTGTTCTTGAGGTGTGAG 248378 Query 10230 TACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGAC 10289 | || || |||| | ||| | |||||||| || ||||| ||||||||| Sbjct 248377 TGGAGCAGGCAGGCAAAGTCAGTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAG 248318 Query 10290 AAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCG 10349 || ||||| |||||||| || || || |||||||| |||| ||| || || Sbjct 248317 AAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCC 248258 Query 10350 GAGAACAGAAGACCCTCCAC 10369 ||||| | | |||||| || Sbjct 248257 GAGAAGAAGATACCCTCGAC 248238 >seq21 Length=2295224 Score = 84.2 bits (92), Expect = 4e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| | |||||| ||||||||||| | || || || || | |||||| || Sbjct 1877333 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTC 1877392 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || |||||||||||||||||||| |||||||| ||| Sbjct 1877393 TTGCCCGTGAGGGTCTTGACGAAAATCTGCATGATG 1877428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621916148240