Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq40 179 7e-40
seq39 159 6e-34
seq5 145 1e-29
seq21 84.2 4e-11
>seq40
Length=1419383
Score = 179 bits (198), Expect = 7e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| | | |||| ||| || || ||||| || |||||||| || || |||
Sbjct 110360 CCGCCACGAAGTCTGAGCACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGAG 110419
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || |||||||| |||||||| ||||| | || ||||| || ||
Sbjct 110420 AGCGTACGGCCATCCTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGG 110479
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||| ||||||| ||||||| ||||| ||||| | |||||| |||
Sbjct 110480 ATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATTGTGTCGGATGATTCAACT 110539
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || || || ||||||||||| ||||||||
Sbjct 110540 TCGAGTGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 110586
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | || | ||| || ||||| || || |||||||| || ||||||
Sbjct 110588 CCACCACGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAG 110647
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || || || | |||||||| || |||
Sbjct 110648 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGA 110707
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| || ||||| | |||||| ||||||||||| | || || ||
Sbjct 110708 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCGACC 110767
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || ||||| || || ||||||||||||||||| ||||||||
Sbjct 110768 TCAAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 110814
>seq39
Length=1607033
Score = 159 bits (176), Expect = 6e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || || ||||| || |||||||| || |||||
Sbjct 1034983 CCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 1034924
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || || | || ||||| || |||
Sbjct 1034923 AGAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 1034864
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| ||||||||||| | || || ||
Sbjct 1034863 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 1034804
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| | ||||||||| || ||||| ||||||||||||||
Sbjct 1034803 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 1034766
Score = 113 bits (124), Expect = 8e-20
Identities = 253/380 (67%), Gaps = 24/380 (6%)
Strand=Plus/Plus
Query 173099 AAAATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGGTAAC 173158
|| ||||| || ||||||||||||| || || | || || || ||| ||||| |||
Sbjct 1188957 AAGATTGATACCGTTATGCACTTTGCAGCACAATCTCACGTCGATCTCTCCTTCGGAAAC 1189016
Query 173159 TCGCTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTCTCCTGGAATGCGCGAGG 173218
|| | || || |||||||||||| || || || | || || ||| || |
Sbjct 1189017 TCTTATGACTTCACATACGCCAACGTCTACGGCACTCATGTATTGCTAGAGTGCATGAAG 1189076
Query 173219 CTCTATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACGAAGTATACGGCGAGAGC 173278
||||| || || ||||||| |||||||||| || || || || || ||
Sbjct 1189077 ACGTATGGAA---TCAAGAAGTTCATCCATGTGTCTACGGATGAGGTCTATGGTGA---- 1189129
Query 173279 AGTCTGGGCAAAAAAGAAGGCCTCGATGAACA-CTCGTC--------CCTCGAGCCAACA 173329
|||| ||||| || |||||| | |||| ||||| || |||
Sbjct 1189130 AGTC--------AAAGATGGAGCCGATGATCTTCTCGAAGATGCCATCCTCGCCCCTACA 1189181
Query 173330 AACCCATATGCAGCAGCCAAGGCTGGTGCCGAAATGATGGCACGTGCATATCACACATCG 173389
||||||||||| ||| ||||||||| || || ||||||| || || || |||
Sbjct 1189182 AACCCATATGCCGCATCCAAGGCTGCCGCAGAGATGATGGTACACGCTTACTACAAGAGC 1189241
Query 173390 TACAAGCTACCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCCGCATCAGTTCCCC 173449
| |||||||| |||||| | ||| |||||||||| ||||| || || ||||| |||
Sbjct 1189242 TTTAAGCTACCCGTCATCATCGTCCGCAGCAACAATGTCTATGGTCCTCACCAGTTTCCC 1189301
Query 173450 GAAAAAATGATCCCAAAATT 173469
|| || | ||||| || ||
Sbjct 1189302 GAGAAGGTCATCCCGAAGTT 1189321
>seq5
Length=936409
Score = 145 bits (160), Expect = 1e-29
Identities = 297/440 (68%), Gaps = 6/440 (1%)
Strand=Plus/Minus
Query 9933 TTCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCC 9992
|||||||| || ||||||||||| || || | |||||||||||||| ||||||
Sbjct 248674 TTCATGACACCAGCCTTCTGGTAGTCACCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCA 248615
Query 9993 TCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAA 10052
| || || ||| |||||||||||| |||||||| ||| | |||||| |
Sbjct 248614 GCCAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCTTGGTAGATCTTGGGTTCG 248555
Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112
||||| || || | ||||| || |||||||||||||| |||| ||| || | | |
Sbjct 248554 CCGAGGGCGAGGAGCAGACGGTCGGCAACGAACTCGATGTATTGGCACATGAGCTTTGCG 248495
Query 10113 TTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172
|||||||| | | || |||| ||| || | | ||| |||| ||| |||||||
Sbjct 248494 TTCATGCCGAGGAGAGCACACGGGAGGGCATCTGACAGGAACTCCTGCTCGATGGCGACG 248435
Query 10173 GCTTCCTCGACGATGCTCT---TTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAA 10229
| ||||| |||| ||| || | ||| || ||||||||| ||| | ||
Sbjct 248434 G---CCTCGGTGATGATCTCACGGACGAGCTCAGCAGAGGGCTTGTTCTTGAGGTGTGAG 248378
Query 10230 TACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGAC 10289
| || || |||| | ||| | |||||||| || ||||| |||||||||
Sbjct 248377 TGGAGCAGGCAGGCAAAGTCAGTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAG 248318
Query 10290 AAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCG 10349
|| ||||| |||||||| || || || |||||||| |||| ||| || ||
Sbjct 248317 AAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCC 248258
Query 10350 GAGAACAGAAGACCCTCCAC 10369
||||| | | |||||| ||
Sbjct 248257 GAGAAGAAGATACCCTCGAC 248238
>seq21
Length=2295224
Score = 84.2 bits (92), Expect = 4e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| ||||| | |||||| ||||||||||| | || || || || | |||||| ||
Sbjct 1877333 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTC 1877392
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| |||||||||||||||||||| |||||||| |||
Sbjct 1877393 TTGCCCGTGAGGGTCTTGACGAAAATCTGCATGATG 1877428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621916148240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |