Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq5 132 6e-26
>seq5
Length=936409
Score = 132 bits (146), Expect = 6e-26
Identities = 356/536 (66%), Gaps = 10/536 (2%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| ||||| | ||||||||||||||| ||||| || ||| ||| ||||||||
Sbjct 248654 GTAGTCACCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGCGAGATGTTCTCCAT 248595
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 125877
|| || || ||||| | | | | || | || | || | ||| |||||
Sbjct 248594 GAAGTCGAAGGGGTTGGTGGCTTGGTAGATCTTGGGTTCGCCGAGGGCGAGGAGCAGACG 248535
Query 125878 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 125937
|| | ||| |||| ||||| | |||| || | |||||| |||| ||| |||
Sbjct 248534 GTCGGCAACGAACTCGATGTATTGGCACATGAGCTTTGCGTTCATGCCGAGGAGAGCACA 248475
Query 125938 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTG 125997
||||| || || | | |||| ||| ||| || | ||||| || | ||| | |
Sbjct 248474 CGGGAGGGCATCTGACAGGAACTCCTGCTCGATGGCGACGGCCTCGGTGATGATCTCACG 248415
Query 125998 AATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCT---TGAAG-AGTTCCACGGCAAACT 126053
| | || | | ||| || | | | || | || || || || |||||| |
Sbjct 248414 GACGAGCTC-AGCAGAGGGCTTGTTCTTGAGGTGTGAGTGGAGCAGG--CA-GGCAAAGT 248359
Query 126054 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGA 126113
| ||| | |||||||||||| |||||||| || || |||||| || || |||||||
Sbjct 248358 CAGTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCATGA 248299
Query 126114 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCA 126173
|||| |||||||| | |||||| || | | || ||||||||||||||||| ||||| |
Sbjct 248298 GACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCCGAGAAGAAGATACCCTCGA 248239
Query 126174 CACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA-AACCACTTC 126232
|| || || || | | || |||| || | || | | |||| || | ||||||
Sbjct 248238 CAGCGGCAAAGGCGATCAAGCG-GCAGCCAAAGGTCGAGTCCTTGTCGCAGATCCACTTG 248180
Query 126233 ATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288
| ||||| | |||||| ||| ||| || || | | ||| || || | |||||
Sbjct 248179 AGGGCCCAGTCGGCCTTTCTCTTGATGCAAGGAATGTTCTCAATGGCGTTGAAGAG 248124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353286389360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |