Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq5 143 3e-29 seq39 100 3e-16 seq40 98.7 9e-16 >seq5 Length=936409 Score = 143 bits (158), Expect = 3e-29 Identities = 355/528 (67%), Gaps = 23/528 (4%) Strand=Plus/Plus Query 47061 GAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACAT-TGAAA-ACG 47118 |||| ||| || ||| | ||||||||||| |||||| | |||| || || | | | Sbjct 248139 GAGAACATTCCTTGCATCAAGAGAAAGGCCGACTGGGCCCTCAAGTGGATCTGCGACAAG 248198 Query 47119 AAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCT 47178 | || | || |||| | || |||||||| || ||| |||||||| ||||||||| Sbjct 248199 GACTCGAC-CTTTGGCTGC-CGCTTGATCGCCTTTGCCGCTGTCGAGGGTATCTTCTTCT 248256 Query 47179 CGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGT 47238 |||| ||| || | || || | | || | || | ||||| || || || | Sbjct 248257 CGGGTTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTTACCT 248316 Query 47239 TTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCT---CT 47295 | ||||||||| |||||| | ||||| || ||||||| |||||||||| || | Sbjct 248317 TCTCCAACGAGCTCATCTCGCGTGACGAGGGTATGCACACTGACTTTGCCTGCCTGCTCC 248376 Query 47296 ACT-ACAACACTAGAGTCGATCAAAAG---TTGGACGTGCCCACCGTCAGCGACATGTTT 47351 ||| ||| | | ||| | ||| | | | || | ||| | || || | Sbjct 248377 ACTCACACCTCAAGA-------ACAAGCCCTCTGCTGAGCTC---GTCCGTGAGATCATC 248426 Query 47352 GCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAAT-CTTTAGT 47410 |||| ||||||||||| ||| |||||| | | || || || |||| | || | | Sbjct 248427 ACCGAGGCCGTCGCCATCGAGCAGGAGTTCCTGTCAGATGCCCT-CCCGTGTGCTCTCCT 248485 Query 47411 GGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGT 47470 || |||||||| || | ||| | | |||||||| || || |||||||| |||||| | Sbjct 248486 CGGCATGAACGCAAAGCTCATGTGCCAATACATCGAGTTCGTTGCCGACCGTCTGCTCCT 248545 Query 47471 TCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACAT 47530 || | |||||||| ||||| || || || ||||| || ||| | ||||| Sbjct 248546 CGCCCTCGGCGAACCCAAGATCTACCAAGCCACCAACCCCTTCGACTTCATGGAGAACAT 248605 Query 47531 TTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 ||||| | |||||||||||||| ||||||||| | || || || || Sbjct 248606 CTCGCTGGCTGGCAAGACCAACTTCTTCGAGAAGAGAGTTGGTGACTA 248653 >seq39 Length=1607033 Score = 100 bits (110), Expect = 3e-16 Identities = 145/201 (72%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| ||| || ||||| ||||| Sbjct 1034953 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTTCCG 1034894 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 1034893 GCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 1034834 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | |||||| || | ||| | || ||||| || || || Sbjct 1034833 ACGTTG-TCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGT 1034775 Query 127096 TTTTACAAAAATCTGCATGGC 127116 || || || |||| |||| Sbjct 1034774 CTTGAC--GAAGCTGCGTGGC 1034756 >seq40 Length=1419383 Score = 98.7 bits (108), Expect = 9e-16 Identities = 129/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| |||| || || ||| || || || || || ||| Sbjct 110846 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCGTCTTCGAGTTGCTTGCCA 110905 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||||||||| ||||| |||||||| |||||| ||| || |||| Sbjct 110906 GCGAAGATAAGACGCTGCTGATCCGGAGGAATGCCCTCTTTGTCCTGGATCTTGCTCTTG 110965 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCA 127091 | |||| |||| ||||| | | ||| || || | || | || |||||||||| Sbjct 110966 ACGTTG-TCGATAGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTGCCGGTCA 111020 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| || | || ||||| || || || ||||| || | ||| || ||| || Sbjct 110377 CACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGGCCATCCTC 110436 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 | ||| ||||| ||| |||| | |||||||| || || || || ||||||||||| Sbjct 110437 CAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCTTG 110496 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| || ||||| |||| |||| ||||| | || ||||||| || | || | Sbjct 110497 GATCTTTGACTTGACGTTG-TCGATTGTGTCGGATGATTCAACTTCGAGTGTGATGGTCT 110555 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||||||||| || || || |||||||| Sbjct 110556 TGCCGGTCAGAGTCTTGACGAAGATCTGCAT 110586 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || || ||||| ||| | ||||| ||| || ||||| || ||| Sbjct 110618 GTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCA 110677 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| ||||| || || || || ||||| ||||||||| ||| || |||| Sbjct 110678 GCAAAGATCAGGCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTG 110737 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | |||||| || | || | || ||||| || || || Sbjct 110738 ACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTAATGGTCTTGCCAGTGAGGGTC 110797 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 110798 TTGACGAAAATCTGCAT 110814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500550362080