Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq5 143 3e-29
seq39 100 3e-16
seq40 98.7 9e-16
>seq5
Length=936409
Score = 143 bits (158), Expect = 3e-29
Identities = 355/528 (67%), Gaps = 23/528 (4%)
Strand=Plus/Plus
Query 47061 GAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACAT-TGAAA-ACG 47118
|||| ||| || ||| | ||||||||||| |||||| | |||| || || | | |
Sbjct 248139 GAGAACATTCCTTGCATCAAGAGAAAGGCCGACTGGGCCCTCAAGTGGATCTGCGACAAG 248198
Query 47119 AAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCT 47178
| || | || |||| | || |||||||| || ||| |||||||| |||||||||
Sbjct 248199 GACTCGAC-CTTTGGCTGC-CGCTTGATCGCCTTTGCCGCTGTCGAGGGTATCTTCTTCT 248256
Query 47179 CGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGT 47238
|||| ||| || | || || | | || | || | ||||| || || || |
Sbjct 248257 CGGGTTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTTACCT 248316
Query 47239 TTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCT---CT 47295
| ||||||||| |||||| | ||||| || ||||||| |||||||||| || |
Sbjct 248317 TCTCCAACGAGCTCATCTCGCGTGACGAGGGTATGCACACTGACTTTGCCTGCCTGCTCC 248376
Query 47296 ACT-ACAACACTAGAGTCGATCAAAAG---TTGGACGTGCCCACCGTCAGCGACATGTTT 47351
||| ||| | | ||| | ||| | | | || | ||| | || || |
Sbjct 248377 ACTCACACCTCAAGA-------ACAAGCCCTCTGCTGAGCTC---GTCCGTGAGATCATC 248426
Query 47352 GCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAAT-CTTTAGT 47410
|||| ||||||||||| ||| |||||| | | || || || |||| | || | |
Sbjct 248427 ACCGAGGCCGTCGCCATCGAGCAGGAGTTCCTGTCAGATGCCCT-CCCGTGTGCTCTCCT 248485
Query 47411 GGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGT 47470
|| |||||||| || | ||| | | |||||||| || || |||||||| |||||| |
Sbjct 248486 CGGCATGAACGCAAAGCTCATGTGCCAATACATCGAGTTCGTTGCCGACCGTCTGCTCCT 248545
Query 47471 TCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACAT 47530
|| | |||||||| ||||| || || || ||||| || ||| | |||||
Sbjct 248546 CGCCCTCGGCGAACCCAAGATCTACCAAGCCACCAACCCCTTCGACTTCATGGAGAACAT 248605
Query 47531 TTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578
||||| | |||||||||||||| ||||||||| | || || || ||
Sbjct 248606 CTCGCTGGCTGGCAAGACCAACTTCTTCGAGAAGAGAGTTGGTGACTA 248653
>seq39
Length=1607033
Score = 100 bits (110), Expect = 3e-16
Identities = 145/201 (72%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| | ||||| ||| || ||||| |||||
Sbjct 1034953 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTTCCG 1034894
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||||| |||||||| || || || ||||||||||||||| ||| || ||||
Sbjct 1034893 GCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 1034834
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| |||| |||||| | |||||| || | ||| | || ||||| || || ||
Sbjct 1034833 ACGTTG-TCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGT 1034775
Query 127096 TTTTACAAAAATCTGCATGGC 127116
|| || || |||| ||||
Sbjct 1034774 CTTGAC--GAAGCTGCGTGGC 1034756
>seq40
Length=1419383
Score = 98.7 bits (108), Expect = 9e-16
Identities = 129/176 (73%), Gaps = 2/176 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || ||||| ||||| |||| || || ||| || || || || || |||
Sbjct 110846 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCGTCTTCGAGTTGCTTGCCA 110905
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | ||||||||||| ||||| |||||||| |||||| ||| || ||||
Sbjct 110906 GCGAAGATAAGACGCTGCTGATCCGGAGGAATGCCCTCTTTGTCCTGGATCTTGCTCTTG 110965
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCA 127091
| |||| |||| ||||| | | ||| || || | || | || ||||||||||
Sbjct 110966 ACGTTG-TCGATAGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTGCCGGTCA 111020
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
||||| || | || ||||| || || || ||||| || | ||| || ||| ||
Sbjct 110377 CACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGGCCATCCTC 110436
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
| ||| ||||| ||| |||| | |||||||| || || || || |||||||||||
Sbjct 110437 CAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCTTG 110496
Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
||| || ||||| |||| |||| ||||| | || ||||||| || | || |
Sbjct 110497 GATCTTTGACTTGACGTTG-TCGATTGTGTCGGATGATTCAACTTCGAGTGTGATGGTCT 110555
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||||||||||||| || || || ||||||||
Sbjct 110556 TGCCGGTCAGAGTCTTGACGAAGATCTGCAT 110586
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || || || || || ||||| ||| | ||||| ||| || ||||| || |||
Sbjct 110618 GTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCA 110677
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| ||||| || || || || ||||| ||||||||| ||| || ||||
Sbjct 110678 GCAAAGATCAGGCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTG 110737
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| |||||| | |||||| || | || | || ||||| || || ||
Sbjct 110738 ACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTAATGGTCTTGCCAGTGAGGGTC 110797
Query 127097 TTTACAAAAATCTGCAT 127113
|| || |||||||||||
Sbjct 110798 TTGACGAAAATCTGCAT 110814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500550362080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |