Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq5 129 7e-25
>seq5
Length=936409
Score = 129 bits (142), Expect = 7e-25
Identities = 354/535 (66%), Gaps = 8/535 (1%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| || || | ||||||||||||||| ||||| ||| | || ||| ||||||||
Sbjct 248654 GTAGTCACCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGCGAGATGTTCTCCAT 248595
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 127350
|| || || ||||| | | | | || | || | || | ||| |||||
Sbjct 248594 GAAGTCGAAGGGGTTGGTGGCTTGGTAGATCTTGGGTTCGCCGAGGGCGAGGAGCAGACG 248535
Query 127351 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 127410
|| | ||| |||| ||||| | |||| || | |||||| |||| ||| |||
Sbjct 248534 GTCGGCAACGAACTCGATGTATTGGCACATGAGCTTTGCGTTCATGCCGAGGAGAGCACA 248475
Query 127411 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTG 127470
||||| || || | | |||| ||| ||| ||| | || || || | ||| | |
Sbjct 248474 CGGGAGGGCATCTGACAGGAACTCCTGCTCGATGGCGACGGCCTCGGTGATGATCTCACG 248415
Query 127471 AATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCA--CAG-CAAACTC 127527
| | | || | ||| || | | | | || | || | || ||| |||| ||
Sbjct 248414 GAC-GAGCTCAGCAGAGGGCTTGTTCTTGAGGTGTG--AGTGGAGCAGGCAGGCAAAGTC 248358
Query 127528 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 127587
||| | |||||||||||| |||||||| || || |||||| ||||| ||||||||
Sbjct 248357 AGTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCATGAG 248298
Query 127588 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 127647
||| |||||||| | |||||| || | | || || || ||||||||||| ||||| ||
Sbjct 248297 ACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCCGAGAAGAAGATACCCTCGAC 248238
Query 127648 ACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCA 127706
| || || || | | || | |||||| || | | |||| || | |||||| |
Sbjct 248237 AGCGGCAAAGGCGATCAAGCGGCAGCCAAAGG-TCGAGTCCTTGTCGCAGATCCACTTGA 248179
Query 127707 TCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAG 127761
||||| | |||||| ||| ||| || || | | ||| || || | |||||
Sbjct 248178 GGGCCCAGTCGGCCTTTCTCTTGATGCAAGGAATGTTCTCAATGGCGTTGAAGAG 248124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506877908720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |