Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq40 145 2e-29 seq39 145 2e-29 seq21 87.8 4e-12 >seq40 Length=1419383 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||| || || ||||| ||||| |||||||| |||| ||||||||||| | || Sbjct 110366 CGAAGTCTGAGCACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTA 110425 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| |||| ||||||||||||||||||||| ||||||||||| || || || Sbjct 110426 CGGCCATCCTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGGATACCC 110485 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || |||||| ||| ||| |||| ||||| | || ||| || || | Sbjct 110486 TCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATTGTGTCGGATGATTCAACTTCGAGT 110545 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || ||||| || || || || || Sbjct 110546 GTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTG 110583 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | |||||||||||||| || || ||||| |||| ||||||||| | | ||| Sbjct 110594 CGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTG 110653 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || || ||||| || ||||| ||||| || ||| ||| Sbjct 110654 CGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGAATGCCT 110713 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| |||||| | | || || || | Sbjct 110714 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGA 110773 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| || || || ||||| || Sbjct 110774 GTAATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTG 110811 Score = 118 bits (130), Expect = 2e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| |||||||||||||| || | ||||||||| || || | || ||| Sbjct 110831 AGGACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCGTCT 110890 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| || |||||||| ||||||||||| |||||| ||| || ||| ||| Sbjct 110891 TCGAGTTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGAGGAATGCCCTCTTTGTCC 110950 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||||| | | || || || | ||||| ||| Sbjct 110951 TGGATCTTGCTCTTGACGTTGTCGATAGTGTCAGAAGACTCAACCTCAAGAGTGATGGTC 111010 Query 199598 TTACCCGT 199605 || || || Sbjct 111011 TTGCCGGT 111018 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || ||||||||||||||||||||||| ||||| | || | | || |||||| ||||| Sbjct 110460 CTCATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGCTCTCTGACTACAACATCCAG 110401 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || ||||| ||||| ||||| || | |||||||| Sbjct 110400 AAGGAGTCAACTCTGCACCTGGTGCTCAGACTTCG 110366 >seq39 Length=1607033 Score = 145 bits (160), Expect = 2e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| |||||||||||||| |||| ||||||||| | | ||| | ||||| Sbjct 1034968 AGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 1034909 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||| || |||||||||||||| ||| || || ||| Sbjct 1034908 TCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 1034849 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 1034848 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTC 1034789 Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620 || ||||| || || || || || Sbjct 1034788 TTGCCCGTAAGGGTCTTGACGAA 1034766 Score = 87.8 bits (96), Expect = 4e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || |||||||||||||||||| | || ||||| | ||| | |||| |||||| ||||| Sbjct 1034883 CTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACTCTTTCCGACTACAACATCCAG 1034942 Query 200995 AAAGAGTCTACTCTTCACCTTGT 201017 || ||||| |||||||||||||| Sbjct 1034943 AAGGAGTCGACTCTTCACCTTGT 1034965 >seq21 Length=2295224 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| |||||| |||| ||||||||| | | || | ||||| Sbjct 1877140 AGGACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1877199 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || |||||||| || |||||||||||||| Sbjct 1877200 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGG 1877240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920965592814