Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq40 145 2e-29
seq39 145 2e-29
seq21 87.8 4e-12
>seq40
Length=1419383
Score = 145 bits (160), Expect = 2e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||| || || ||||| ||||| |||||||| |||| ||||||||||| | ||
Sbjct 110366 CGAAGTCTGAGCACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTA 110425
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| |||| ||||||||||||||||||||| ||||||||||| || || ||
Sbjct 110426 CGGCCATCCTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGGATACCC 110485
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || |||||| ||| ||| |||| ||||| | || ||| || || |
Sbjct 110486 TCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATTGTGTCGGATGATTCAACTTCGAGT 110545
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || ||||| || || || || ||
Sbjct 110546 GTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTG 110583
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | |||||||||||||| || || ||||| |||| ||||||||| | | |||
Sbjct 110594 CGAAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTG 110653
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||| || || ||||| || ||||| ||||| || ||| |||
Sbjct 110654 CGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGAATGCCT 110713
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || |||| |||||| | | || || || |
Sbjct 110714 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGA 110773
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || ||||| || || || ||||| ||
Sbjct 110774 GTAATGGTCTTGCCAGTGAGGGTCTTGACGAAAATCTG 110811
Score = 118 bits (130), Expect = 2e-21
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||||||||| |||||||||||||| || | ||||||||| || || | || |||
Sbjct 110831 AGGACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCGTCT 110890
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || ||||| || |||||||| ||||||||||| |||||| ||| || ||| |||
Sbjct 110891 TCGAGTTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGAGGAATGCCCTCTTTGTCC 110950
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| ||||| | | || || || | ||||| |||
Sbjct 110951 TGGATCTTGCTCTTGACGTTGTCGATAGTGTCAGAAGACTCAACCTCAAGAGTGATGGTC 111010
Query 199598 TTACCCGT 199605
|| || ||
Sbjct 111011 TTGCCGGT 111018
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994
|| ||||||||||||||||||||||| ||||| | || | | || |||||| |||||
Sbjct 110460 CTCATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGCTCTCTGACTACAACATCCAG 110401
Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029
|| ||||| ||||| ||||| || | ||||||||
Sbjct 110400 AAGGAGTCAACTCTGCACCTGGTGCTCAGACTTCG 110366
>seq39
Length=1607033
Score = 145 bits (160), Expect = 2e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||||||||| |||||||||||||| |||| ||||||||| | | ||| | |||||
Sbjct 1034968 AGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 1034909
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||||||||||||||| || |||||||||||||| ||| || || |||
Sbjct 1034908 TCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 1034849
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | | || || || | ||||| |||
Sbjct 1034848 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTC 1034789
Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620
|| ||||| || || || || ||
Sbjct 1034788 TTGCCCGTAAGGGTCTTGACGAA 1034766
Score = 87.8 bits (96), Expect = 4e-12
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994
|| |||||||||||||||||| | || ||||| | ||| | |||| |||||| |||||
Sbjct 1034883 CTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACTCTTTCCGACTACAACATCCAG 1034942
Query 200995 AAAGAGTCTACTCTTCACCTTGT 201017
|| ||||| ||||||||||||||
Sbjct 1034943 AAGGAGTCGACTCTTCACCTTGT 1034965
>seq21
Length=2295224
Score = 87.8 bits (96), Expect = 4e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| ||||| |||||| |||| ||||||||| | | || | |||||
Sbjct 1877140 AGGACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1877199
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| |||||||| || |||||||| || ||||||||||||||
Sbjct 1877200 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGG 1877240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178920965592814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |