Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq39 138 1e-27 seq40 122 1e-22 seq21 98.7 1e-15 >seq39 Length=1607033 Score = 138 bits (152), Expect = 1e-27 Identities = 143/185 (77%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| |||||||| | || ||||||||||| |||||||| Sbjct 1034948 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAA 1034889 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || |||||||||| |||||| ||||| ||| Sbjct 1034888 GATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 1034830 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | |||||||| |||||||| || || || | Sbjct 1034829 TGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGA 1034770 Query 46581 CAAAG 46585 | ||| Sbjct 1034769 CGAAG 1034765 >seq40 Length=1419383 Score = 122 bits (134), Expect = 1e-22 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| |||| || |||||| ||||| |||||||| || || || || | || || Sbjct 110377 CACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGGCCATCCTC 110436 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 | |||||| |||||||| || | |||||||||||| | || | | ||||||||| Sbjct 110437 CAACTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCTTG 110496 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 |||||| ||||| ||| | | | |||||| ||||| || || | |||||||| | Sbjct 110497 GATCTTTGACTTGA-CGTTGTCGATTGTGTCGGATGATTCAACTTCGAGTGTGATGGTCT 110555 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||| || || || ||||| ||||| Sbjct 110556 TGCCGGTCAGAGTCTTGACGAAGATCTGCAT 110586 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| |||||||| | || || ||||||||||| || || Sbjct 110624 TCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAG 110683 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| |||||| ||||| | || | || ||||||||| |||||| ||||| | Sbjct 110684 ATCAGGCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTG 110743 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| ||| || || || | || ||||| ||||| || || || || || Sbjct 110744 TCGATGGTGTCGGACGACTCGACCTCAAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACG 110803 Query 46583 AAGATTTGCAT 46593 || || ||||| Sbjct 110804 AAAATCTGCAT 110814 >seq21 Length=2295224 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||| ||||||||||| || ||||| | || || ||||||||||| Sbjct 1877155 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 1877214 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 ||||| |||| |||||||||||| | || | | ||||||||| Sbjct 1877215 GCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 1877258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238103249840