Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq5 324 1e-83
seq39 120 3e-22
seq40 114 1e-20
seq21 87.8 2e-12
>seq5
Length=936409
Score = 324 bits (358), Expect = 1e-83
Identities = 600/868 (69%), Gaps = 17/868 (2%)
Strand=Plus/Minus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| || ||| || || || || || || | ||||| || || || || || || |
Sbjct 248672 CATGACACCAGCCTTCTGGTAGTCACCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGC 248613
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710
|| || ||| | ||| || || |||||||||| | | |||| ||||| ||
Sbjct 248612 CAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCTTGGTAGATCTTGGGTTCGCC 248553
Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAAT 132769
||| ||| |||||| | |||||| ||||||||||||||||| ||||| | || || |
Sbjct 248552 GAGGGCGAGGAGCAGACGGTCGGCAACGAACTCGATGTATTGGCACATGAGCTTTGCGTT 248493
Query 132770 TAAGTCCCAGCAGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828
| | || || ||| |||| ||| || || || | || || ||||||||||||||
Sbjct 248492 CATG-CCGAGGAGA-GCACACGGGAGGGCATCTGACAGGAACTCCTGCTCGATGGCGACG 248435
Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAAC 132888
|| ||||||| ||| || | ||| || | || ||| ||| | | | |||
Sbjct 248434 GCCTCGGTGATGATCTCACGGACGAGCTCAGCAGAGGGC--TTGTTCTTGAGGTGTGAGT 248377
Query 132889 --ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946
| || ||| |||||||| |||| |||||||| | || ||||| |||||| ||
Sbjct 248376 GGAGCAGGCAGGCAAAGTCAGTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAGA 248317
Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006
| || | || |||||||| || || || |||||||| || |||| ||||| ||||
Sbjct 248316 AGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCCG 248257
Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066
| ||||||| |||||||| || || || || | || ||| ||| || || | || |
Sbjct 248256 AGAAGAAGATACCCTCGACAGCGGCAAAGGCGATCAAGCGGCAGCCAAAGGTCGAGTCCT 248197
Query 133067 TGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGA 133126
|| | |||||| || ||||| ||||||||| |||| ||| || || | || |
Sbjct 248196 TGTCGCAGATCCACTTGAGGGCCCAGTCGGCCTTTCTCTTGATGCAAGGAATGTTCTCAA 248137
Query 133127 TGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGT 133184
||||||| || | | || | | || | ||| ||| | ||| |||||||||||
Sbjct 248136 TGGCGTTGAAGAG--GTAGGTACGCTGCTTAGGTTCGCTGATGTATGTGTCGATGAGCAA 248079
Query 133185 CGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGC 133244
|| || | || ||||| | ||||||||| ||| || || ||||| ||||| | ||
Sbjct 248078 TGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCTGGC 248019
Query 133245 CTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGT 133303
||| | ||| || || |||| |||||||||||| || || ||||||||||| ||||
Sbjct 248018 CTCAGGGATCTGGACCTCG-GAGCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCGT 247960
Query 133304 CGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGC 133363
| ||| ||||| || || || ||||| |||||| ||||||| |||||| | ||
Sbjct 247959 CAGAGGCAGCGAAGAAAGCGAGGACGTGAGAGATGAAGAAACGCTCGTCGTCGTTGAGGC 247900
Query 133364 G---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACG 133420
| | ||||||| | ||||||||| || || | ||||||| ||||||| || || |
Sbjct 247899 GTCTGTTCCAGTCGTGAAGGTCCTTGGAAAGATCAATCTCCTCGGCGGTCCAGAAAGAGG 247840
Query 133421 CCTCGGCTTTTTTGTACATACTCCACAT 133448
| ||||| || |||||||| |||| ||
Sbjct 247839 CTTCGGCCTTCTTGTACATGTTCCAGAT 247812
>seq39
Length=1607033
Score = 120 bits (132), Expect = 3e-22
Identities = 153/208 (74%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||| ||||||||| | || |||||| || |||||| | |
Sbjct 1034766 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 1034825
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | || || |||| ||||| ||||| |||||| | ||||| ||||| ||
Sbjct 1034826 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCT 1034884
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | ||| || || ||||| || || | ||||| || ||||||||||||||| ||
Sbjct 1034885 GATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAA 1034944
Query 38432 GGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||| |||| || || | || || |||
Sbjct 1034945 GGAGTCGACTCTTCACCTTGTCCTCCGT 1034972
>seq40
Length=1419383
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||| || | || |||||| | ||
Sbjct 110814 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACCATTACTCTTGAGGTCGAGTCGTCC 110755
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| || || |||||| | ||||||
Sbjct 110754 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAA 110695
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | || ||||| ||||| || || | ||||| ||| ||||||||||
Sbjct 110694 CAGCGCCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTCTCCGACTACAAC 110635
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||| |||||| | || || || | || || |||
Sbjct 110634 ATCCAGAAGGAATCCACACTCCACCTTGTCCTCCGT 110599
Score = 111 bits (122), Expect = 2e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| |||||||| |||| || || | ||
Sbjct 110586 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACACTCGAAGTTGAATCATCC 110527
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || ||| |||| ||||| ||||| || ||| | |||||
Sbjct 110526 GACACAATCGACAACG-TCAAGTCAAAGATCCAAGACAAGGAGGGTATCCCCCCAGACCA 110468
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || ||| |||| || | || || ||| ||||||||
Sbjct 110467 GCAGCGCCTCATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGCTCTCTGACTACAA 110408
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| ||||| | || ||||| |||||||
Sbjct 110407 CATCCAGAAGGAGTCAACTCTGCACCTGGTGCT 110375
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326
|| ||||| |||||||| | || || ||| | | |||| | | |||| | ||||
Sbjct 111018 ACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCTGACACTATCGACAACG--TCAAGA 110961
Query 38327 AAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385
|| |||| ||||||||||| ||||| | || || ||||| || || | ||| ||||
Sbjct 110960 GCAAGATCCAGGACAAAGAGGGCATTCCTCCGGATCAGCAGCGTCTTATCTTCGCTGGCA 110901
Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445
| || || || |||| || ||||| | |||||||||||| || ||||| |||| || |
Sbjct 110900 AGCAACTCGAAGACGGTCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCGACTCTTC 110841
Query 38446 ATTTGGTGCTGCGTTTGAGAGGCGG 38470
| | || || ||| || | || ||
Sbjct 110840 ACCTTGTCCTTCGTCTGCGTGGTGG 110816
>seq21
Length=2295224
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| ||||| || ||| | ||||| ||||| || || | ||| ||||| ||||| ||
Sbjct 1877258 GACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAG 1877199
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434
|| | ||||||||| ||||||||||||||| |||||
Sbjct 1877198 GATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGA 1877161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172537409280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |