Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq42 251 9e-62 seq3 217 2e-51 seq38 111 2e-19 >seq42 Length=1255954 Score = 251 bits (278), Expect = 9e-62 Identities = 477/694 (69%), Gaps = 16/694 (2%) Strand=Plus/Plus Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA-AGGAGTCTCGAATCGAAAT 7463 |||||||| || ||||| ||||| | |||||| | || | || | | ||||| | Sbjct 499742 TTCTTATGCTTGCGTTTGAACTCATTGACGAAGTGGTTGACAAGACGGTTG--TCGAAGT 499799 Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523 | |||||||||||||| || || || || || | ||||| || |||||||| | |||| Sbjct 499800 CCTCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCCTCCTCAA 499859 Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583 || | | | ||||||||| || ||||||||||| || || || ||||| ||||| | Sbjct 499860 TGGTAAGGAGCGAAACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACGTTGCGCT 499919 Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 | | || ||||| || |||||||| || || || || || || || || || || | Sbjct 499920 CACCCTCAACCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCGGTAGGCTCGTTGATGA 499979 Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703 |||| || ||| ||||||||||| | ||||| || || || || || || || | Sbjct 499980 TACGGAGGACGTTAAGGCCAGCAATCAGACCGGCATCCTTGGTAGCCTGGCGCTGAGAGT 500039 Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 |||| |||||||| ||||| || ||||| |||| |||| | ||| || || || | Sbjct 500040 CGTTGAAGTAGGCAGGGACAGTGACGACAGCGTTGTTGACGGTGCCACCAAGGTAGGACT 500099 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAA---CT 7820 | ||| | || ||| ||||| || ||||| || |||||||| || | | || || Sbjct 500100 CGGCGGTCTCACGCATCTTGGTGAGGACCATGGAGGAAATCTCCTCGGGGGTGAAGGTCT 500159 Query 7821 GTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAA 7880 |||| ||||| || || || || | || | ||| || |||| ||| | Sbjct 500160 -TTTC--CTCACCCTTGAACTCGACCTGAACAACGGGCTT---GCCAGCCTTCTCGATGA 500213 Query 7881 CCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGA 7940 |||| | | | | ||||| ||| | || |||| || | ||||| | || | Sbjct 500214 CCTTGAAGGGGAAGTGCTTCATGTCGGCCTGAACCTCAGCATCGGCGAACTTGCGGCCAA 500273 Query 7941 TAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCG 8000 | |||||||| ||||| || || ||||| | |||||||| || |||||||| |||| Sbjct 500274 TGAGACGCTTGGCATCGAAGACGGTGTTGTGAGGGTTCATAGCGACCTGGTTCTTGGCCG 500333 Query 8001 CGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGAT 8060 ||| ||||| ||||| || | || || || || ||| |||| || || || || | Sbjct 500334 AGTCACCGATCAGACGCTC---GGTGTCGGTGAAGGCAACGAACGAGGGAGTGGTGCGGT 500390 Query 8061 TCCCTTGGTCGTTCGCAATAATTTCTACGCGGTC 8094 | || |||||||| || ||||| || | |||||| Sbjct 500391 TACCCTGGTCGTTGGCGATAATCTCAATGCGGTC 500424 >seq3 Length=1038388 Score = 217 bits (240), Expect = 2e-51 Identities = 518/778 (67%), Gaps = 10/778 (1%) Strand=Plus/Minus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| |||||||| ||| | | ||| || |||||||| | | || || Sbjct 742314 TCCTCGAAACGAGCACGGGTGATGTTGGCGTTGAAGTCCTCGCCGTCGAAGAGGGAGTCG 742255 Query 7307 ATTTCAATGGTTGTTTGTG--CCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCG 7364 || || | ||| | || | |||| | | | | || ||||| || ||||| || || | Sbjct 742254 ATCTCGACGGTGGCCTGGGTACCGTTGGAAAGA--GTACGCTTGGCACGCTCGCAAGCAG 742197 Query 7365 TTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAA 7424 ||| | |||||| |||||||| | | |||||||| || |||||| || || | | Sbjct 742196 TTCTCAGACGACGGAGGGCACGAGCATCACCGGAAAGGTCCTTCTTAGTCTTGCGGGTGA 742137 Query 7425 ACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTAT 7484 | || | |||||| |||||| | | ||||| || | |||||||||||| || | Sbjct 742136 ATTCCTTCTTGAAGTGCTCAAGGAGGTTGGTGTCGAAGTCCTGACCACCCAAGTGGGTGT 742077 Query 7485 CCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAA 7544 | || ||||| || ||||| |||| ||| || | |||| | | |||||||| | Sbjct 742076 CACCAGCGGTGGCCTTGACAGTGAAGACACCACCCTGGATGTGGAGGAGGGAAACATCGA 742017 Query 7545 ACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC---TTTGTTCTTAT 7601 | ||||||||||| || || | ||||| ||||| || | ||| ||| | Sbjct 742016 AAGTACCACCACCGAGATCGTAGATGAGGACGTTGCGCTCCTTGTCAGACTTGCCGGAAC 741957 Query 7602 CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGC 7661 |||||||||| || || || || || || || || || || ||||| ||| ||| |||| Sbjct 741956 CGAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGTTGATGATACGGAGAACGTTGAGGC 741897 Query 7662 CAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGA 7721 ||||||| | | || || || || ||||| || || ||||| |||||||| |||| Sbjct 741896 CAGCAATGGCACCGGCGTCCTTGGTGGCTTGACGCTGGTTGTCGTTGAAGTAGGCGGGGA 741837 Query 7722 CCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTT 7781 | || ||||| || | | ||| ||||| ||||| | | || |||| || ||||| | Sbjct 741836 CGGTAACGACGGCCTTAGCGACCTTCTTGCCGAGCTTGGTCTCAGCGACCTCCTTCATCT 741777 Query 7782 TGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAAT 7841 || || ||||| || || ||||| | | | || || || || ||| | | Sbjct 741776 TGAGGAGGACCATGGAGGAGATCTCCTGGGGAGAGAAAGTCTTGGTCTCGCCGAGGTACT 741717 Query 7842 CAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCA 7901 |||| | | |||||| ||||| | | | ||| ||| | | ||| | | Sbjct 741716 CAACCTGGACCATGGG-GGATCCGTTG--TTGTCGGTAATCTTGAAGGGCCACGACTCAA 741660 Query 7902 TATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAA 7961 | || | | ||| |||| || | | ||||| | |||||| |||| || | Sbjct 741659 TGTCCTTCTTGACGGTGGGGTCATCGAATCTACGACCGATCAAACGCTTGACATCGAAGA 741600 Query 7962 CTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTC 8019 | ||||| | |||||||||||| | |||||||| || || || ||||| ||||| || Sbjct 741599 CGGTGTTCTCGGGGTTCATGGCGGCCTGGTTCTTGGCGGCCTCACCGATCAGACGCTC 741542 >seq38 Length=1749017 Score = 111 bits (122), Expect = 2e-19 Identities = 229/337 (68%), Gaps = 9/337 (3%) Strand=Plus/Plus Query 7450 TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA 7509 |||| ||| || || |||||||| | || ||||| || || || || | ||| || || Sbjct 453848 TCTCTGATCAAAGTCCTCACCACCGAGATGGGTATCACCAGCAGTAGCCTGGACCTCGAA 453907 Query 7510 GATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG---GTCAAA 7566 || || | || | | | | | || ||||| || ||||||||||| || || | Sbjct 453908 GACGCCATCGTCGACGGTCAGAATGGAGACATCGAAGGTACCACCACCGAGATCGTAGAC 453967 Query 7567 AATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGC 7626 ||||| | ||| || ||| | | |||| ||||| ||||| || | ||| || || Sbjct 453968 AATGA--TCTGGCGT-TCCTCGCC---GGTCTTGTCGAGTCCGTAGGCCAGAGCGGCAGC 454021 Query 7627 CGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGT 7686 || ||||| || | | ||| ||| ||| ||||| || || || | ||||| || || Sbjct 454022 GGTAGGTTCGTTGACGACACGGAGAACGTTGAGGCCGGCGATGGTGCCGGCATCCTTGGT 454081 Query 7687 CGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTT 7746 || || || | || || |||||||| ||||| || || || |||| ||||| || Sbjct 454082 GGCGGCACGCTGGGCGTCATTGAAGTAGGCGGGGACGGTAACAACGGCGTTGGTGACCTT 454141 Query 7747 CTTACCGAGATACGATTCCGCGATATCTTTCATTTTG 7783 || || || ||||| || |||| || ||||| ||| Sbjct 454142 CTCGCCAAGGTACGACTCGGCGACTTCCTTCATCTTG 454178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132466555280