Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5 145 9e-30 >seq5 Length=936409 Score = 145 bits (160), Expect = 9e-30 Identities = 343/510 (67%), Gaps = 11/510 (2%) Strand=Plus/Minus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 |||||||| || ||||| |||||||| || ||||| ||| | || |||||||| ||||| Sbjct 248653 TAGTCACCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGCGAGATGTTCTCCATG 248594 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGATTGGTGGTTGACCAACTTGTTTCAGAAGACGA 119327 ||||| || || || ||| | |||| |||| || | || ||||| Sbjct 248593 AAGTCGAAGGGGTTGGTGGCTTGGTAGATCTTGGGTTCGCCGAGGGCGAGGAGCAGACGG 248534 Query 119328 TCGGAGACATACTCGATATATTCGGACATCT--TTTCCGAATTCATACCTATGAGATTAC 119385 |||| || ||||||| |||| | |||| ||| || ||||| || | |||| || Sbjct 248533 TCGGCAACGAACTCGATGTATTGGCACATGAGCTTTGCG--TTCATGCCGAGGAGAGCAC 248476 Query 119386 ACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGG-AG 119444 ||||||| ||||| | ||| | || |||||| | || || || | | ||| | Sbjct 248475 ACGGGAGGGCATCTGACAGGAACTCCTGCTCGATGGCGACGGCCTCGGTGATGATCTCAC 248416 Query 119445 TGAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACAACTCTACGGCAAATTCT 119504 || || | | | || || ||||| | | | || | | |||||| || Sbjct 248415 GGACGAGCT-CAGCAGAGGGCTTGTTCTTGAGGTGTGAGTGGAGCAGGCAGGCAAAGTCA 248357 Query 119505 TGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGT 119564 || | || || || || ||||||||||| || |||| ||| ||||||||||| Sbjct 248356 GTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAGACCAGGCATGAGA 248297 Query 119565 CCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACA 119624 || | ||||| ||||| ||||||| | || || || |||||||| ||||| ||| Sbjct 248296 CCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCCGAGAAGAAGATACCCTCGACA 248237 Query 119625 CAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAG 119680 ||| || |||| | || |||| |||||||||| |||||| || ||||||||| Sbjct 248236 GCGGCAAAGGCGATCAAGCG-GCAGCCAAAGGTCGAGTCCTTGTCGCAGATCCACTTGAG 248178 Query 119681 AGCCCAGTTGGCCTTACGCTCTATGCAGGG 119710 ||||||| |||||| | || ||||| || Sbjct 248177 GGCCCAGTCGGCCTTTCTCTTGATGCAAGG 248148 Score = 134 bits (148), Expect = 2e-26 Identities = 281/412 (68%), Gaps = 9/412 (2%) Strand=Plus/Plus Query 11591 CGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG-AG 11649 ||||||| ||||| || || |||| |||||| | ||| || | ||||||||| | Sbjct 545585 CGAAACCATCCATCTCAGTAAGAATCTGGTTAAGCGTAGCCTCTCTCTCATCGTTACCAC 545644 Query 11650 GGCATACCACCTGCCGAACGCTT--CTTACCGACAGCGTCAATCTCATCGATGAATACGA 11707 || | ||| | ||| ||| || | ||| ||||||||||||||||| | | Sbjct 545645 CGCCAAAGTTTTGCTTAGATCTTGACTTTCCAATAGCATCAATCTCATCGATGAAGATAA 545704 Query 11708 TACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACAC 11767 | || || | | | || | | ||| || || ||||| | || ||||||| Sbjct 545705 TGCAGGGCGTGCTCTTTCTGGCATTCTGGAACAGATCGCGTACTCTTGAAGCACCAACAC 545764 Query 11768 CTACGAACATCTCAACGAAGTTTGCGGCAGA-ACACTGAATGAAGGGAACATTAGACTCA 11826 | ||||||||||||||||| | | || |||||||| ||| || ||| ||||||| Sbjct 545765 CGACGAACATCTCAACGAACTCAGAACCACTGACACTGAA-GAATGGTACACCAGACTCA 545823 Query 11827 CCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCG 11886 ||||| | || ||||| ||||||||||| |||||||| | ||||| ||||| || Sbjct 545824 CCAGCAGTTGCCTTTGCGAGCAGAGTCTTACCGGTACCAGGAGGACCAGAGAGAATAGCA 545883 Query 11887 CCACGGGGGATCTTGGCACCA--CTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCA 11944 || | |||||||| || ||| ||| | ||||||| || | ||| ||||||| | Sbjct 545884 CCTCTAGGGATCTTTGCGCCAAGCTT--TTGGAAGCGCTCGGGTTGCTTCAGGAAGTTGA 545941 Query 11945 CAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 ||| |||| | || |||| || ||| ||||| |||| |||| ||| Sbjct 545942 CAAACTCCATGATCTCGACCTTTGCTTCGTCCATACCAGCAACGTCGGCGAA 545993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975690787600