Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq39 154 3e-32 seq40 143 6e-29 seq21 86.0 1e-11 >seq39 Length=1607033 Score = 154 bits (170), Expect = 3e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||||||||| ||||| || || || ||||| |||| |||||| | ||||| ||| Sbjct 1034965 ACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCG 1034906 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || |||||||| || ||||| || Sbjct 1034905 AGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 1034846 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||| || || || |||||||| | ||||| Sbjct 1034845 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 1034786 Query 195112 CCTGTCAAAGTTTTTACGAA 195131 || || | || || ||||| Sbjct 1034785 CCCGTAAGGGTCTTGACGAA 1034766 >seq40 Length=1419383 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||| || || || || ||||| |||| ||||| | ||||| || Sbjct 110606 ACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCA 110665 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || ||||||||||| ||||||||||| ||||| || Sbjct 110666 AGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 110725 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || |||||||| || || || ||||| |||| ||||| Sbjct 110726 ATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTAATGGTCTTG 110785 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 110786 CCAGTGAGGGTCTTGACGAAAATCTGCAT 110814 Score = 143 bits (158), Expect = 6e-29 Identities = 144/187 (77%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||||||||| ||||| || ||||| ||||| ||| || || | || |||||| Sbjct 110834 ACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCGTCTTCG 110893 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || ||||||||||| || || || || ||||||||||| |||||||| || Sbjct 110894 AGTTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGAGGAATGCCCTCTTTGTCCTGG 110953 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || || ||||| ||| || || ||||| || | ||||| Sbjct 110954 ATCTTGCTCTTGACGTTGTCGATAGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTG 111013 Query 195112 CCTGTCA 195118 || |||| Sbjct 111014 CCGGTCA 111020 >seq21 Length=2295224 Score = 86.0 bits (94), Expect = 1e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||||||| ||| || || || ||||| |||| || || | ||||| || Sbjct 1877143 ACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCA 1877202 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| || |||||||| || || || ||||| || || || || || |||||| Sbjct 1877203 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCT 1877259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481002960214