Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq40 98.7 6e-16 seq39 87.8 1e-12 >seq40 Length=1419383 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || || | || |||| |||| ||| |||||||| || Sbjct 110396 TCCTTCTGGATGTTGTAGTCAGAGAGCGTACGGCCATCCTCCAACTGCTTTCCGGCGAAG 110455 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| | || | ||||||||||| ||||| |||||| Sbjct 110456 ATGAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTG 110515 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||||| |||| || ||||| || || || |||||||| || Sbjct 110516 TCGATTGTGTCGGATGATTCAACTTCGAGTGTGATGGTCTTGCCGGTCAGAGTCTTGACG 110575 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 110576 AAGATCTGCATA 110587 >seq39 Length=1607033 Score = 87.8 bits (96), Expect = 1e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| ||||| | || |||| || ||||| |||||||| || Sbjct 1034947 TCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAG 1034888 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 1034887 ATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 1034828 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || || | ||| ||||| || ||||| || ||||| || Sbjct 1034827 TCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACG 1034768 Query 34971 AAG 34973 ||| Sbjct 1034767 AAG 1034765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633433828176