Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq5 275 1e-68 seq40 217 3e-51 >seq5 Length=936409 Score = 275 bits (304), Expect = 1e-68 Identities = 573/853 (67%), Gaps = 16/853 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| || ||| |||||||||||| ||||||||||| Sbjct 247812 ATCTGGAACATGTACAAGAAGGCCGAAGCCTCTTTCTGGACCGCCGAGGAGATTGATCTT 247871 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594 |||||||| | ||| |||| || | ||| ||||| ||| ||| ||| | Sbjct 247872 TCCAAGGACCTTCACGACTGGAACAGACGCCTCAACGACGACGAGCGTTTCTTCATCTCT 247931 Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || |||||||| ||||| || |||||||| || |||| | Sbjct 247932 CACGTCCTCGCTTTCTTCGCTGCCTCTGACGGTATCGTCAACGAGAACCTCGTCGAGCGT 247991 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | || || ||| | ||||||| || ||||||||||||||||| || Sbjct 247992 TTCAGCTCCGAGGTCCAGATCCCTGAGGCCAGATGCTTCTACGGTTTCCAGATCATGATG 248051 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773 || || | ||||| ||| || | ||| | || ||||| ||| || | Sbjct 248052 GAGAACATTCACTCCGAGACCTACTCATTGCTCATCGACACATACAT--CAG-CGAACCT 248108 Query 25774 GAG-AGAGATCGG--CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 || || | | || || ||||| ||| |||| || |||||||||| ||||| Sbjct 248109 AAGCAGCGTACCTACCTCTTCAACGCCATTGAGAACATTCCTTGCATCAAGAGAAAGGCC 248168 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 |||||| | ||||||||| | | || | | || |||||| || || | ||| Sbjct 248169 GACTGGGCCCTCAAGTGGATCTGCGACAAGGACTCGACCTTTGGCTGCCGCTTGATCGCC 248228 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAG 25950 ||||| ||||| ||||| ||||| ||| ||||| || || ||||||||||||||||| Sbjct 248229 TTTGCCGCTGTCGAGGGTATCTTCTTCTCGGGTTCCTTCGCTTCCATCTTCTGGCTCAAG 248288 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || || |||||| || || ||| ||||||||||||||| | ||||||||| Sbjct 248289 AAGCGTGGTCTCATGCCTGGTCTTACCTTCTCCAACGAGCTCATCTCGCGTGACGAGGGT 248348 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAA 26070 | |||| || ||||||||||||||| || | ||| | |||| || ||| Sbjct 248349 ATGCACACTGACTTTGCCTGCCTGCTCCACTC---ACACCTCAAGAACAAGCCCTCTGCT 248405 Query 26071 GAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNN 26130 ||| |||| ||||||| ||||| || | |||||| ||||||| | Sbjct 248406 GAGCTCGTCCGTGAGATCATCACCGAGGCCGTCGCCATCGAGCAGGAGTTCCTGTCAGAT 248465 Query 26131 NNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTAT 26190 | ||||||||| | |||||| |||||||||| |||| Sbjct 248466 GCCCTCCCGTGTGCTCTCCTCGGCATGAACGCAAAGCTCATGTGCCAATACATCGAGTTC 248525 Query 26191 GTGGCCGACCATCTGCT--GTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACC 26248 || ||||||| |||||| ||| | | || | | ||| ||||| | | |||| Sbjct 248526 GTTGCCGACCGTCTGCTCCTCGCCCTCGGCGA-ACCCAAGA-TCTACCAAGCCACCAACC 248583 Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308 | |||||||| ||||| ||||| ||| ||| || |||||||||||||| || ||||| | Sbjct 248584 CCTTCGACTTCATGGAGAACATCTCGCTGGCTGGCAAGACCAACTTCTTCGAGAAGAGAG 248643 Query 26309 TCGGCGACTATCA 26321 | || ||||| || Sbjct 248644 TTGGTGACTACCA 248656 >seq40 Length=1419383 Score = 217 bits (240), Expect = 3e-51 Identities = 942/1467 (64%), Gaps = 41/1467 (3%) Strand=Plus/Plus Query 221406 CGCAAGACTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT 221465 ||||||| ||||| || ||||||||||||||||| ||||| |||||||| Sbjct 1017140 CGCAAGAAGCAGTCAGAGCGGCGTGGTAGATGGTCTCGAAGATTTGGATGTTGAGTTGTC 1017199 Query 221466 TGGCCTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTA 221525 | |||||||| || ||| ||||| || || | ||| |||| || ||||| | Sbjct 1017200 TAGCCTCGGGCGAGTCGAAAGGCATGCGAAGTGCGAGGAAGGCGTCAGCGAGTCCACTAA 1017259 Query 221526 CTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAA 221585 | || | |||||| || | ||| | | ||||| | || || || || || || Sbjct 1017260 CACCAAGACCGATAGGACGGTGACGCATGTTGCTCTTGCGAGCCTCAGGGACAGGGTAGT 1017319 Query 221586 AGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCT 221645 ||||| ||||| | ||||| | |||| || | ||| | ||| |||||| |||| Sbjct 1017320 GGTTGATTTCGATGATCTTGTTCAAGTTCTTGGTAACGACCTGAACAACCTCGTGAAGCT 1017379 Query 221646 TCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGG 221705 ||| |||| | |||| | || |||| | | || || || | | || | Sbjct 1017380 TCT------TGAAGTCGAACTT--CTCC-TCGTTCATG---TCGACGAAGGTGGGAAGAG 1017427 Query 221706 CAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTG 221765 ||| |||| ||| || ||||| ||||| || || |||| ||||| || | Sbjct 1017428 CAAGCGAAGCCAAGTTGCAGACGGCGACCTCATCAGGAGCAGTGTACTCGATGATTTCAG 1017487 Query 221766 TACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAG 221825 | || |||||| || ||| || |||| || || || |||||| ||| | Sbjct 1017488 TGCACAGGTTGGAGCTGCGAATGACACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGG 1017547 Query 221826 CGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCC 221885 | |||||||| ||||| ||||| || ||||| ||||||| | || || || || Sbjct 1017548 CATCCTTGTACAGCATGAAGGGGTTACCGGTCTCGGTCTGAGCCTCGAGGATAGCGTACC 1017607 Query 221886 AGAGTTCTCTGG-CGCTCACCGTCCTCTTGACTGCACCCT-CGGTCTTTTCATACCCGGT 221943 | || | ||||| ||| | || || ||| | ||| || || | | | || Sbjct 1017608 ACAGCT-TCTGGGCGCGGATGGTG-TCGCGACCACGGCCTTCGCGCTCGTACTTCTCG-- 1017663 Query 221944 ATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACA 222003 || || | || |||| || |||||| | ||| ||| || ||||| ||| || Sbjct 1017664 -TACAGAACCTCGAACTCGTCGCCGTACACGTCGGCCAAACCAGGACATTCACTGGGGCA 1017722 Query 222004 CATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAG 222063 ||||||| ||||| ||| | | ||| | || ||||||||| || |||||||| || Sbjct 1017723 CATCAGAGTCCAGGTGGAGTTCTGCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAG 1017782 Query 222064 CGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAA 222123 || | |||||||| | || || |||||| || | ||| || | ||||| | Sbjct 1017783 AGCGTAGAAGAGATCGCGGGCACGAACTTCCTCCTTACCATGGTTCTTGCGGAGATCGAG 1017842 Query 222124 AAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTT 222183 || | || | ||| |||||||| ||||| || |||| ||| | || || || ||||| Sbjct 1017843 GAAGGCGAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTT 1017902 Query 222184 GTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCA 222242 |||||| |||||||| || || ||| | |||||| | || || | || || | Sbjct 1017903 GTTGCCGCCCTGATCGACGTATCT-GGCAGTGTTGTTGAAAACACGGAGCATGGGCACGA 1017961 Query 222243 GTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG- 222301 | ||||||||| |||||||| || |||||| | || ||| | | | | || Sbjct 1017962 GGCCGTTGGATGTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACGAATG-CAGTGA 1018020 Query 222302 GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361 || | || || ||||| |||| || ||||||||||||||| ||||||| ||||| Sbjct 1018021 GCGTTGAGACCAATGCCACCTGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCG 1018080 Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421 ||||| || || ||||| ||||| | | | || || || || | | |||| Sbjct 1018081 TAAATGCCATCAATTGAGTCGTCCTTCATATCAATCAAGAAGCATGAAGCGAGTTGAGGC 1018140 Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATC 222481 | | | | ||| | || || ||||| |||||| || ||||| ||||| Sbjct 1018141 TGAGGAGTTCCGGCACTGAAGAGGGTGGGCGAGGCGTGAGTGAAGTACTTGAGTGACATA 1018200 Query 222482 AGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTC 222541 || | ||| ||||| | | | |||| | || || || || | ||| | | Sbjct 1018201 AGGTTGTATGTCTCAATGGCAGCCTCGATATCCTCGCCATGGATACCAACAGCGACACGC 1018260 Query 222542 ATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGCTGGA----GAGCAGGTACGA 222597 ||| ||| | |||||| ||||| | |||| | | || || ||| || || || Sbjct 1018261 ATGATCATCTGCTGGGGTCTCTCGGC--GACC--TTGCCCTCGAGTCTGAGGAGATATGA 1018316 Query 222598 TTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGC 222657 ||||| ||||||||| || ||||| | | || || |||||| ||| || | ||| Sbjct 1018317 ACGTTCCAAAGTCTTGAAACCGAAGTACTGGTAGTTGAAATCTCTGTCGTAGACGATGGC 1018376 Query 222658 GGCGTCCAGC---TCCGACTTGTGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAG 222714 | || ||| || | | || | | || | || | | ||| || | | Sbjct 1018377 TGAGTTGAGCTCTTCAGCATGGTCCATGACTGT---CTTGTATGTCTCCTCGGAGATCAT 1018433 Query 222715 GGGAGCG-TTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAG 222773 ||| ||| |||| ||||| | |||||| || | ||||||||| | | ||| || ||| Sbjct 1018434 GGGGGCGCGTCTC-TTGGTCTTGGGGTTGACATAGTGGTACAGATCTGAGATGACAGCAG 1018492 Query 222774 AGAAC-GTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATA 222832 | ||| | || | ||||||||||| || || |||||||| || || | || | || Sbjct 1018493 AAAACTGCTTCTTG-GTCTGCTTGTGGAGGTTTGACACGGCAATACGTGCAGCGAGGACG 1018551 Query 222833 CCATAGTCAGGGTGCACGGTGGTCATG 222859 | ||||| ||||| ||| |||||| Sbjct 1018552 GCGTAGTCGGGGTGGGTGGTTGTCATG 1018578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844312356480