Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq11 145 2e-29 >seq11 Length=2522318 Score = 145 bits (160), Expect = 2e-29 Identities = 208/293 (71%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||| | | ||||| || |||||||||||| ||||| ||| || || || ||||| Sbjct 1515752 TCTTCAAGAGCCTTGACTAGACGACGCTGAATGTAACCGGTTTCAGCAGTCTTGACAGCA 1515811 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 ||||| || | ||| |||||||| |||| || |||||||| | |||| ||| | Sbjct 1515812 GTATCGATCAAACCCTCACGACCAGCCATGGCGTGGAAGAAGAACTCTGAGGGTGTCAAG 1515871 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751 || | || | | ||| |||| |||||||| || | ||||| || | ||| |||||| Sbjct 1515872 CCGCGAAGATAAGAGTTCTCGACGAAACCTCGAGATTCGGGAGAGTAATCGTCCTTGGTG 1515931 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 ||||| || || | ||||| || ||||| | || ||||||||||| |||||| ||| Sbjct 1515932 AAGTGAGGAAGCGACCTGTACTTGAAGCCGAAAGGAATACGCTTTCCCTCAACGGACTGT 1515991 Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 || || | | | | |||| ||||| || || | | | |||||||| || Sbjct 1515992 TGACCGACGACAGCAGTCATTTGCGAGATGTTGATAGCCGAACCCTTGGATCC 1516044 Score = 102 bits (112), Expect = 2e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || |||||||| | | || || || || | | |||||||||| | || | | Sbjct 1581408 ATCAGACCACAGATCTCGCAGACGTGAACACGGAAAGCATCAGAAACATCGAGCAATCTC 1581349 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| |||| ||| |||||||| | ||||||||||| |||||||| || |||||| Sbjct 1581348 TCCTTCAAGAAGGCAGAAGCACCGTGAGCGATCATACAATCGCGCTCCATCTCTCCGAAA 1581289 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570 || ||||||||||| || || ||||| ||| |||| |||||||| Sbjct 1581288 CGCAGACCACCATCACGTGCTCTACCTTCGACAGGTTGACGAGT 1581245 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATT 233331 |||||||||||| ||||||||||| || ||||| || || | |||||||||||||||| Sbjct 1581331 AGCACCGTGAGCGATCATACAATCGCGCTCCATCTCTCCGAAACGCAGACCACCATCACG 1581272 Query 233332 TGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATT 233391 || ||||| | ||| | ||||||||| || | | ||||| |||||||| | Sbjct 1581271 TGCTCTACCTTCGACAGGTTGACGAGTCAAGATCTGGGTAGGACCACGAGCACGAGCGTG 1581212 Query 233392 AATTTTATCTTTAACCATATG 233412 ||| || || | ||||| || Sbjct 1581211 AATCTTGTCGTCGACCATGTG 1581191 Score = 87.8 bits (96), Expect = 5e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||||| || ||||| ||| ||||| || ||||| ||||||||||| || || ||| Sbjct 1580976 TGGGCAATGGTCATTCGAGAAGGAATGGCGTGGGGGTTGATGATGATATCAGGAACAAGT 1580917 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957 || || || ||||| ||||| | ||| | | || || | || || || |||||||| Sbjct 1580916 CCGTCGGCGGTGAAAGGCATGT-CTTCTTGACGGTAGGTGATACCGATGGTACCCTTTTG 1580858 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||| ||||| |||||||| Sbjct 1580857 ACCGTGACGAGAAGCAAACTTGTCACCAAT 1580828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816807978154