Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5 159 4e-33 seq1 152 6e-31 seq40 150 2e-30 seq8 125 9e-23 >seq5 Length=936409 Score = 159 bits (176), Expect = 4e-33 Identities = 230/322 (71%), Gaps = 7/322 (2%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || | | |||||| |||||||||||||| | |||||||| Sbjct 248662 GCCTTCTGGTAGTCACCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGCGAGATG 248603 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTT---TTCGCATCCGAGCGAC 868807 |||||| | ||| ||||||| | | |||| ||| ||||| |||| | Sbjct 248602 TTCTCCATGAAGTCGAAGGGGTTGGTGGCTTGGTAGATCTTGGGTTCGC---CGAGGGCG 248546 Query 868808 GCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCG 868867 |||||| |||||||| || ||||||||||| ||||||||||| |||||||||||| Sbjct 248545 AGGAGCAGACGGTCGGCAACGAACTCGATGTATTGGCACATGAGCTTTGCGTTCATGCCG 248486 Query 868868 ATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACG 868927 | ||| || ||| || | || || ||||| | |||||| ||||||||||| | Sbjct 248485 AGGAGAGCACACGGGAGGGCATCTGACAGGAACTCCTGCTCGATGGCGACGGCCTCGGTG 248426 Query 868928 ATGATCTGCCTGGGCACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987 ||||||| | | | || || ||||||||||| ||| | || |||||||||| Sbjct 248425 ATGATCTCACGGACGAGCTCAGCAGAGGGCTTGTTCTTGAGGTGTGAGTGGAGCAGGCAG 248366 Query 868988 GCAAAGTCGCAGTGCA-ACCCT 869008 |||||||| ||||| ||||| Sbjct 248365 GCAAAGTCAGTGTGCATACCCT 248344 Score = 125 bits (138), Expect = 9e-23 Identities = 225/321 (70%), Gaps = 21/321 (7%) Strand=Plus/Minus Query 869150 GCAGGGACGGCAAAGAGGGCACTATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTA 869209 ||||| | ||||||| || | ||| ||| ||||| || ||| | |||||| Sbjct 248373 GCAGGCA-GGCAAAGT---CAGTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAG 248318 Query 869210 AAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATG---GCGCAGAAACTG 869266 |||| || || |||||||| || |||||||||||||| |||||| ||| || || Sbjct 248317 AAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAA--- 248261 Query 869267 CCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCG 869326 |||||||| ||||| |||||||| ||||||||| |||| | || | ||||| |||| Sbjct 248260 CCCGAGAAGAAGATACCCTCGACAGCGGCAAAGGCGATCAAGCGGCAGCCAAAG--GTCG 248203 Query 869327 AGGCCCTCCTTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGC 869383 || ||||||| ||||||||| | ||||||||||||||| || | | | || Sbjct 248202 AG----TCCTTGTCGCAGATCCACTTGAGGGCCCAGTCGGCCTTTCTCTTGATGCAAGGA 248147 Query 869384 ACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTC 869442 | | || |||||| ||||||| ||| | | | || || ||| || ||||| Sbjct 248146 ATGTTCTCAATGGCGTTGAAGAGGTAGGTACGCTGC-TTAGGTTCGCTGATGTATGTGTC 248088 Query 869443 GATCAGGAGCGAATAGGTCTC 869463 ||| || | || |||||||| Sbjct 248087 GATGAGCAATGAGTAGGTCTC 248067 Score = 122 bits (134), Expect = 1e-21 Identities = 179/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||| |||||||| || ||||||||| ||||| ||| || |||| | | ||| Sbjct 248065 GAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCTGGCCTCAGGGATCTGG 248006 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || | ||||||||| ||||| ||||| ||| ||||| Sbjct 248005 ACCTCGGAGCTGAAACGCTCGACGAGGTTCTCGTTGACGATACCGTCAGAGGCAGCGAAG 247946 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAG-CGACAC--CCAGTGG 869809 ||||| |||||||| ||| ||| |||||||||||| |||| || | ||||| | Sbjct 247945 AAAGCGAGGACGTGAGAGATGAAGAAACGCTCGTCGTCGTTGAGGCGTCTGTTCCAGTCG 247886 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 ||| | || || | ||||||||||||||||| ||||| |||||||| ||| Sbjct 247885 TGAAGGTCCTTGGAAAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCTTCGGCCTTCTTG 247826 Query 869870 TACATCTCCCA 869880 ||||| | ||| Sbjct 247825 TACATGTTCCA 247815 >seq1 Length=1192554 Score = 152 bits (168), Expect = 6e-31 Identities = 138/171 (81%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 1592131 GTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCG 1592189 ||||||| || |||| ||| | ||||| || | ||||| ||| | |||||||||| Sbjct 1157670 GTGGGACCAGAAGTTCATGC-AGGTCGACCAAGAGATGCTCTTCGAGATCATCCTCGCCG 1157728 Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249 |||||||| | ||||||||| | || || || | || |||||| |||| || ||||||| Sbjct 1157729 CCAACTACATGGACATCAAGGCCCTCCTTGACGTCGGCTGCAAGACTGTCGCAAACATGA 1157788 Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||| ||||||||||||||||||||||| |||||| || ||| Sbjct 1157789 TCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 1157839 >seq40 Length=1419383 Score = 150 bits (166), Expect = 2e-30 Identities = 191/263 (73%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || ||| |||||||| | || |||| ||| || || ||||||||||||||||||||||| Sbjct 1017909 GCCCTGATCGACGTATCTGGCAGTGTTGTTGAAAACACGGAGCATGGGCACGAGGCCGTT 1017968 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 ||| ||||||||| || || | ||| | ||| | ||| || | ||| ||| | Sbjct 1017969 GGATGTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACGAATGCAGTGAGCGTTGAG 1018028 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 || ||||| || || ||||||||| | ||||| ||||| |||||||| ||||| Sbjct 1018029 ACCAATGCCACCTGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAAATGCC 1018088 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 || || |||||| ||||||| || | | ||||| || | | ||| || || | || Sbjct 1018089 ATCAATTGAGTCGTCCTTCATATCAATCAAGAAGCATGAAGCGAGTTGAGGCTGAGGAGT 1018148 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCG 1630324 ||||| ||||||| ||||||| Sbjct 1018149 TCCGGCACTGAAGAGGGTGGGCG 1018171 Score = 91.5 bits (100), Expect = 2e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 ||| ||||| ||| |||| || ||||| ||||| ||||| || || |||||||| Sbjct 1017759 CATGAAGAGATCAGGGATCCAGAGAGCGTAGAAGAGATCGCGGGCACGAACTTCCTCCTT 1017818 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 || |||||||| ||| ||||| || ||| | |||||||||||| ||||| ||||| Sbjct 1017819 ACCATGGTTCTTGCGGAGATCGAGGAAGGCGAAGACGTCGGCGTGCCAGGGCTCGAGGTA 1017878 Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 | ||| || || || |||||| |||||| Sbjct 1017879 GATGGCGAATGCACCAGGACGCTTGTTGCCGCC 1017911 >seq8 Length=668548 Score = 125 bits (138), Expect = 9e-23 Identities = 221/321 (69%), Gaps = 6/321 (2%) Strand=Plus/Minus Query 18096 CTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCAT 18155 || ||||||||||||| | | ||||| |||||| ||||||| ||||||||| |||| Sbjct 616202 CTATGGCGAGTCGCACTGCCTCAGTGTCGGATGCATCGTCGACGGAGTGCCGCCGGGCAT 616143 Query 18156 GCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGC 18215 | || ||||||||||||||||||||||| || | ||| ||||||| ||| |||| Sbjct 616142 GGAGCTCACCGAGGCCGACATCCAGCCTCAGATGACCAGACGCAGACCGGGACAGAGCGC 616083 Query 18216 ACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGG 18275 | | || || ||||| ||| || ||| |||||||||||||| ||| || Sbjct 616082 CATCACAACACCACGCAATGAGAAGGACAAGGTCGAGATCCAGTCGGGCACTGAGTTTGG 616023 Query 18276 CCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGA 18335 |||| || ||| | ||| | ||| | || ||| ||||| | ||| || Sbjct 616022 TGTCACTCTGGGCACCCCCATTGGCATGCGCGTCATGAACGAGAACCAGAGACCCAAGGA 615963 Query 18336 CTATTCCGACATGTGCAAGG---TG---CCGCGGCCCTCACACGCCGACTACACCTACAT 18389 ||| | ||| || || || || || ||| |||||||||| |||||| | Sbjct 615962 CTACGGCAACAGCACCATGGACCTGTACCCTCGCCCCAGTCACGCCGACTGGACCTACCT 615903 Query 18390 GGCCAAGTACGGCATCAAGGC 18410 || ||||||||| ||||||| Sbjct 615902 GGAGAAGTACGGCGTCAAGGC 615882 Score = 104 bits (114), Expect = 3e-16 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 19044 GAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGC 19103 ||||||||||| || || | || || ||||| || ||||| || | || || || Sbjct 615526 GAGGACAGCATTGGTGGTAACGTCACTTGCGTTATCCGTAACGTCCCCTCTGGTCTGGGT 615467 Query 19104 GAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCC 19163 ||||| || || |||||||| ||||| ||| ||||||||||||||| ||||| ||| Sbjct 615466 GAGCCATGTTTCGACAAGATGGAGGCAAAGCTGGCCCACGCCATGCTGAGCATCCCTGCC 615407 Query 19164 ACCAAGGGATTCGAGATTGG 19183 || ||||| ||||||||||| Sbjct 615406 ACAAAGGGCTTCGAGATTGG 615387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107135753283314