Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq40 100 2e-16 >seq40 Length=1419383 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || || | ||||| || || || || |||||||| || || Sbjct 110816 CCACCACGCAGACGAAGGACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGCTC 110875 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| || |||||||| |||||||| | || | | ||||||||||| ||| Sbjct 110876 AGGGTACGACCGTCTTCGAGTTGCTTGCCAGCGAAGATAAGACGCTGCTGATCCGGAGGA 110935 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||||||||| || | || ||||| | || | |||||||||| || || Sbjct 110936 ATGCCCTCTTTGTCCTGGATCTTGCTCTTGACGTTGTCGATAGTGTCAGAAGACTCAACC 110995 Query 29740 TCAAGAGTTATAGTTTTGCCAGT 29762 |||||||| || || ||||| || Sbjct 110996 TCAAGAGTGATGGTCTTGCCGGT 111018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219002815922