Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq40 114 3e-20
seq39 100 7e-16
>seq40
Length=1419383
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || ||||| | ||||| ||| || |||
Sbjct 110583 CAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACACTCGAAGTTGAATCATCCGAC 110524
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| |||| || ||| |||||| ||||| || || || || || ||| ||
Sbjct 110523 ACAATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGTATCCCCCCAGACCAGCAG 110464
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||||||||||||||| ||||| | || | | || |||||| ||
Sbjct 110463 CGCCTCATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGCTCTCTGACTACAACATC 110404
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| ||||| ||||| ||||| || | ||||||||
Sbjct 110403 CAGAAGGAGTCAACTCTGCACCTGGTGCTCAGACTTCG 110366
Score = 91.5 bits (100), Expect = 3e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || |||||| | || || || ||||||||| |||| || |||
Sbjct 111018 ACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCTGACACTATCGACAACGTCAAGAGC 110959
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| || || ||||| || ||| ||||| || | ||||||||||| || |||
Sbjct 110958 AAGATCCAGGACAAAGAGGGCATTCCTCCGGATCAGCAGCGTCTTATCTTCGCTGGCAAG 110899
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| | ||||| || | || || ||| |||||| | ||||| ||||| |||||||||
Sbjct 110898 CAACTCGAAGACGGTCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCGACTCTTCAC 110839
Query 206374 CTTGT 206378
|||||
Sbjct 110838 CTTGT 110834
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
|||||||| | || ||||| ||||| ||||| ||||||| || ||||||| | ||
Sbjct 110366 CGAAGTCTGAGCACCAGGTGCAGAGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTA 110425
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| ||||| |||| |||||||||||||||||| || || || ||
Sbjct 110426 CGGCCATCCTCCAACTGCTTTCCGGCGAAGATGAGGCGCTGCTG 110469
>seq39
Length=1607033
Score = 100 bits (110), Expect = 7e-16
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || || || || ||||| | || || || || ||||| ||||
Sbjct 1034771 CAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAA 1034830
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| || || || || || ||| |||||| || | || |||||
Sbjct 1034831 CGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATCTT 1034890
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||||||||||||| | || ||||| | ||| | |||| |||||| ||||||| |||||
Sbjct 1034891 CGCCGGAAAGCAGCTCGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAAGGAGTC 1034950
Query 206364 TACTCTTCACCTTGT 206378
||||||||||||||
Sbjct 1034951 GACTCTTCACCTTGT 1034965
Score = 86.0 bits (94), Expect = 1e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
|||||||||||||| ||||| ||||||| || ||||| | | ||| | ||||| ||
Sbjct 1034965 ACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCG 1034906
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
|||||||||||||||||||| || || || ||
Sbjct 1034905 AGCTGCTTTCCGGCGAAGATCAGGCGCTGCTG 1034874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820164032682
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |