Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq5 223 5e-52 seq40 143 4e-28 >seq5 Length=936409 Score = 223 bits (246), Expect = 5e-52 Identities = 367/514 (71%), Gaps = 24/514 (5%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || |||||||| ||||| || ||||||||||||||| | || | Sbjct 247811 GATCTGGAACATGTAC-AAGAAGGCCGAAGCCTCTTTCTGGACCGCCGAGGAGATTGATC 247869 Query 1455835 TCGGCGCCGACACGGTCCACTGGGT--GTCGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 | | ||| | ||||| | ||| | | |||||||||||| |||||| Sbjct 247870 TTTCCAAGGACCTTCACGACTGGAACAGACGCCTCAACGACGACGAGCGTTTCTTCATCT 247929 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||||||||| ||| ||||| ||| || || ||||| ||||||||| | || Sbjct 247930 CTCACGTCCTCGC-TTTCTTCGCTGCCTCTGACGGTATCGTCAACGAGAACCTCGTCGAG 247988 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || | |||||||| | || ||||| | | || ||||| ||||||||| Sbjct 247989 CGTTTCAGCTCCGAGGTCCAGATCCCTGAGGCCAGATGCTTCTACGGTTTCCAGATCATG 248048 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||| ||||| || |||||||| | || |||||||| ||| ||| || || Sbjct 248049 ATGGAGAACATTCACTCCGAGACCTACTCATTGCTCATCGACACATACATCAGCGAACCT 248108 Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 || | ||| ||||||| |||||| || | | || | | | || |||||| Sbjct 248109 AAGCAGC-GTACCTACCTCTTCAACGCCATTGAGAACATTCCTTGCATCAAGAGAAAGGC 248167 Query 1456131 CGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTC 1456187 ||||||||| | ||||||||| ||||||| |||||| ||||| | || ||| Sbjct 248168 CGACTGGGCCCTCAAGTGGATCTGCGACAAGGA----CTCGAC-CTTTGGCT-GCCGCTT 248221 Query 1456188 G-TCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGC---CATCTT 1456242 | ||| ||||||||| |||||||| ||||| |||||||| || || ||| |||||| Sbjct 248222 GATCGCCTTTGCCGCTGTCGAGGGTATCTTCTTCTCGGG---TTCCTTCGCTTCCATCTT 248278 Query 1456243 TTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT 1456276 |||||||||||||| || |||||||| |||||| Sbjct 248279 CTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTT 248312 Score = 138 bits (152), Expect = 2e-26 Identities = 214/297 (72%), Gaps = 9/297 (3%) Strand=Plus/Plus Query 1456448 GGTTTGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACC 1456507 ||| ||||| |||||||||||| |||||| || | ||| |||||||| || | Sbjct 248346 GGTATGCACACTGACTTTGCCTGCCTGCTCCACTCACACCTCAAGAACAAGCCCTCTGCT 248405 Query 1456508 GACGT-GCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTT--TGTCAGC 1456564 || | | || | |||||||| ||||||||||| |||||| | ||||| ||||| Sbjct 248406 GAGCTCGTCCGTG-AGATCATCACCGAGGCCGTCGCCATCGAGCAGGAGTTCCTGTCA-- 248462 Query 1456565 GAGTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGA 1456624 || | || ||| || ||| |||||||||||| || |||||||||||| ||||| | Sbjct 248463 GATGCCCTCCCGTGTGCTCTCCTCGGCATGAACG-CAAAGCTCATGTGCCAATACATCG- 248520 Query 1456625 ATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCC 1456684 | || || |||||||| |||||| || |||||| | ||| ||||| | || Sbjct 248521 AGTTCGTTGCCGACCGTCTGCTCCTCGCCCTCGGC-GAACCCAAGATCTACCAAGCCACC 248579 Query 1456685 AACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 ||||| ||| | |||||| |||||||| | |||||||||||||| |||||| Sbjct 248580 AACCCCTTCGACTTCATGGAGAACATCTCGCTGGCTGGCAAGACCAACTTCTTCGAG 248636 >seq40 Length=1419383 Score = 143 bits (158), Expect = 4e-28 Identities = 192/265 (72%), Gaps = 4/265 (2%) Strand=Plus/Minus Query 259923 CGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCG--TCGTGCTTTCTGTT 259980 ||||||| ||||| | |||||| || || | || || | ||| || ||||| || | Sbjct 1018171 CGCCCACCCTCTTCAGTGCCGGAACTCCTCAGCCTCA--ACTCGCTTCATGCTTCTTGAT 1018114 Query 259981 GGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCAT 260040 || ||||||| ||| || || || ||||| || ||||| |||||| ||||| | || Sbjct 1018113 TGATATGAAGGACGACTCAATTGATGGCATTTACGACACCCTCAAGACCTGCGCCATGAT 1018054 Query 260041 CTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTA 260100 ||||||| || || ||||| ||| | ||| ||| | || ||| | ||| | || Sbjct 1018053 CTCCAAGAACGCAGGTGGCATTGGTCTCAACGCTCACTGCATTCGTGCCACTGGCTCTTA 1017994 Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160 | | || || ||||||||| ||||||||||| ||||||||||| || ||||| ||| | Sbjct 1017993 CATTGCTGGTACCAACGGCACATCCAACGGCCTCGTGCCCATGCTCCGTGTTTTCAACAA 1017934 Query 260161 CACGGCGCGCTACGTCGACCAGTGC 260185 ||| || | |||||||| ||| || Sbjct 1017933 CACTGCCAGATACGTCGATCAGGGC 1017909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177807149022804