Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq39 91.5 1e-13
seq40 86.0 6e-12
>seq39
Length=1607033
Score = 91.5 bits (100), Expect = 1e-13
Identities = 123/169 (73%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | || || | || || |||||||| || || ||
Sbjct 1034948 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAA 1034889
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||||| |||| || |||||||||| |||||| ||| | ||
Sbjct 1034888 GATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 1034830
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
|| | | |||||| || || ||||| | ||||| || || |||||
Sbjct 1034829 TGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 1034781
>seq40
Length=1419383
Score = 86.0 bits (94), Expect = 6e-12
Identities = 123/171 (72%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| ||| || ||| || |||| || || ||||| || || ||
Sbjct 110851 CTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGACCGTCTTCGAGTTGCTTGCCAGCGAA 110910
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | |||||||| |||| ||||| || ||| |||||| |||||| ||| | ||
Sbjct 110911 GATAAGACGCTGCTGATCCGGAGGAATGCCCTCTTTGTCCTGGATCTTGCTCTTGA-CGT 110969
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
|| | | ||||| || || ||||| | ||||| || || || ||||
Sbjct 110970 TGTCGATAGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTGCCGGTCA 111020
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | | || || | || |||| |||||| || || ||
Sbjct 110395 CTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGGCCATCCTCCAACTGCTTTCCGGCGAA 110454
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | || | | ||||||||| ||||||| ||| | ||
Sbjct 110455 GATGAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCTTGGATCTTTGACTTGA-CGT 110513
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | |||||| ||||| || || | ||||| || || || |||| ||| || |
Sbjct 110514 TGTCGATTGTGTCGGATGATTCAACTTCGAGTGTGATGGTCTTGCCGGTCAGAGTCTTGA 110573
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 110574 CGAAGATCTGCAT 110586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793363333360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |