Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017-
05-22] 42 sequences; 26,117,561 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq40 125 1e-23
seq5 89.7 7e-13
>seq40
Length=1419383
Score = 125 bits (138), Expect = 1e-23
Identities = 394/608 (65%), Gaps = 2/608 (0%)
Strand=Plus/Plus
Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576
||||| || || || | || || |||| |||||||||||| | || ||||||| | |
Sbjct 1017673 TCGAACTCGTCGCCGTACACGTCGGCCAAACCAGGACATTCACTGGGGCACATCAGAGTC 1017732
Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636
|| | | || || || ||||| || ||||| || ||||| ||||| |||
Sbjct 1017733 CAGGTGGAGTTCTGCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAAG 1017792
Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696
||||| | || | | ||| || || || || || |||||||| || | |
Sbjct 1017793 AGATCGCGGGCACGAACTTCCTCCTTACCATGGTTCTTGCGGAGATCGAGGAAGGCGAAG 1017852
Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756
| || | ||||| || || || || || || | | || || || || || || |||
Sbjct 1017853 ACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCGCCC 1017912
Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816
||||| | ||||||||||||||| || | || | ||||| || | | || || |||
Sbjct 1017913 TGATCGACGTATCTGGCAGTGTTGTTGAAAACACGGAGCATGGGCACGAGGCCGTTGGAT 1017972
Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACC 69875
| || || || |||| ||| ||| || | || ||||| | | | | | |||||
Sbjct 1017973 GTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACGAAT-GCAGTGAGCGTTGAGACC 1018031
Query 69876 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTC 69935
|| || ||||| | || ||||| | || || || | ||||| || || || ||
Sbjct 1018032 AATGCCACCTGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAAATGCCATC 1018091
Query 69936 TATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCC 69995
|| || || |||| | || | || || || | |||| | || ||||||
Sbjct 1018092 AATTGAGTCGTCCTTCATATCAATCAAGAAGCATGAAGCGAGTTGAGGCTGAGGAGTTCC 1018151
Query 69996 CGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGT 70055
||| | || | || || || ||||||||||| | || || | || ||||||||
Sbjct 1018152 GGCACTGAAGAGGGTGGGCGAGGCGTGAGTGAAGTACTTGAGTGACATAAGGTTGTATGT 1018211
Query 70056 TTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATG 70115
||||| || | || |||||| ||| || || | ||||||||||| | ||| ||
Sbjct 1018212 CTCAATGGCAGCCTCGATATCCTCGCCATGGATACCAACAGCGACACGCATGATCATCTG 1018271
Query 70116 CTGAGGTC 70123
||| ||||
Sbjct 1018272 CTGGGGTC 1018279
>seq5
Length=936409
Score = 89.7 bits (98), Expect = 7e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
|||||| |||||| || | ||||| || | || | ||||| || || || ||
Sbjct 248369 GCAGGCAAAGTCAGTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAG 248310
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|||||||| ||||||||||| |||||||| || |||| ||| || || || || |||||
Sbjct 248309 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCCGAGAAGAA 248250
Query 39736 GATGCCTTCTACTGCTGCAAATGC 39759
||| || || || || ||||| ||
Sbjct 248249 GATACCCTCGACAGCGGCAAAGGC 248226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908439372880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |