Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq40 125 1e-23 seq5 89.7 7e-13 >seq40 Length=1419383 Score = 125 bits (138), Expect = 1e-23 Identities = 394/608 (65%), Gaps = 2/608 (0%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 ||||| || || || | || || |||| |||||||||||| | || ||||||| | | Sbjct 1017673 TCGAACTCGTCGCCGTACACGTCGGCCAAACCAGGACATTCACTGGGGCACATCAGAGTC 1017732 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || | | || || || ||||| || ||||| || ||||| ||||| ||| Sbjct 1017733 CAGGTGGAGTTCTGCTCGACACGCTTCATGAAGAGATCAGGGATCCAGAGAGCGTAGAAG 1017792 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 ||||| | || | | ||| || || || || || |||||||| || | | Sbjct 1017793 AGATCGCGGGCACGAACTTCCTCCTTACCATGGTTCTTGCGGAGATCGAGGAAGGCGAAG 1017852 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 | || | ||||| || || || || || || | | || || || || || || ||| Sbjct 1017853 ACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAATGCACCAGGACGCTTGTTGCCGCCC 1017912 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 ||||| | ||||||||||||||| || | || | ||||| || | | || || ||| Sbjct 1017913 TGATCGACGTATCTGGCAGTGTTGTTGAAAACACGGAGCATGGGCACGAGGCCGTTGGAT 1017972 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACC 69875 | || || || |||| ||| ||| || | || ||||| | | | | | ||||| Sbjct 1017973 GTGCCGTTGGTACCAGCAATGTAAGAGCCAGTGGCACGAAT-GCAGTGAGCGTTGAGACC 1018031 Query 69876 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTC 69935 || || ||||| | || ||||| | || || || | ||||| || || || || Sbjct 1018032 AATGCCACCTGCGTTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAAATGCCATC 1018091 Query 69936 TATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCC 69995 || || || |||| | || | || || || | |||| | || |||||| Sbjct 1018092 AATTGAGTCGTCCTTCATATCAATCAAGAAGCATGAAGCGAGTTGAGGCTGAGGAGTTCC 1018151 Query 69996 CGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGT 70055 ||| | || | || || || ||||||||||| | || || | || |||||||| Sbjct 1018152 GGCACTGAAGAGGGTGGGCGAGGCGTGAGTGAAGTACTTGAGTGACATAAGGTTGTATGT 1018211 Query 70056 TTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATG 70115 ||||| || | || |||||| ||| || || | ||||||||||| | ||| || Sbjct 1018212 CTCAATGGCAGCCTCGATATCCTCGCCATGGATACCAACAGCGACACGCATGATCATCTG 1018271 Query 70116 CTGAGGTC 70123 ||| |||| Sbjct 1018272 CTGGGGTC 1018279 >seq5 Length=936409 Score = 89.7 bits (98), Expect = 7e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||| |||||| || | ||||| || | || | ||||| || || || || Sbjct 248369 GCAGGCAAAGTCAGTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTAAG 248310 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 |||||||| ||||||||||| |||||||| || |||| ||| || || || || ||||| Sbjct 248309 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCCGAGAAGAA 248250 Query 39736 GATGCCTTCTACTGCTGCAAATGC 39759 ||| || || || || ||||| || Sbjct 248249 GATACCCTCGACAGCGGCAAAGGC 248226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908439372880