Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20melanogenum_20[genbank_20GCA_5F002156615.1_202017- 05-22] 42 sequences; 26,117,561 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq40 100 9e-16 >seq40 Length=1419383 Score = 100 bits (110), Expect = 9e-16 Identities = 349/531 (66%), Gaps = 14/531 (3%) Strand=Plus/Minus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| ||||||| ||||||||| || | ||||||||||| || ||| ||| || Sbjct 1017956 CCCATGCTCCGTGTTTTCAACAACACTGCCAGATACGTCGATCAGGGCGGCAACAAGCGT 1017897 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || || || ||| |||||||||| ||||| |||||||||||| | || || | | Sbjct 1017896 CCTGGTGCATTCGCCATCTACCTCGAGCCCTGGCACGCCGAC-GTCTTCGCCTTCCTC-G 1017839 Query 255101 CTGTCCGACAAGACC---GGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTC 255157 | |||| ||||| | || | ||||| | |||||||| ||| | |||| || Sbjct 1017838 ATCTCCG-CAAGAACCATGGTAAGGAGGAAGTTCGTGCCCGCGATCTCTTCTACGCTCTC 1017780 Query 255158 TGGTGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGT 255217 ||| | ||||| || ||| || || || | || ||||||| || ||||| Sbjct 1017779 TGGATCCCTGATCTCTTCATGAAGCGTGTCGAGCAGAACTCCACCTGGACTCTGATGTGC 1017720 Query 255218 CCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTG 255277 |||| || || ||| | | |||| | || |||||||| || ||||| | Sbjct 1017719 CCCAGTGAATGTCCTGGTTTGGCCGACGTGTACGGCGACGAGTTCGAGGTTCTGTACGAG 1017660 Query 255278 GAGTACGAGCGTGCCGGCCG-GTTCG-TACGCCAAGTGCCCGCGAAGAAGATCTGGAACA 255335 |||||||||| | ||||| | ||| || ||| | | ||| ||||| | ||| || Sbjct 1017659 AAGTACGAGCGCGAAGGCCGTGGTCGCGACACCA--TCCGCGCCCAGAAGCTGTGGTACG 1017602 Query 255336 CGATGGT-GCGCATGCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGA-CCACAT 255393 | || | | | | ||| || ||||| | || ||| | || |||| || | Sbjct 1017601 CTATCCTCGAGGCT-CAGACCGAGACCGGTAACCCCTTCATGCTGTACAAGGATGCCTGC 1017543 Query 255394 AAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTCGAACCTGTGCACCGA 255453 || |||| | | ||||| ||| |||| || ||| |||| ||||||||||| || Sbjct 1017542 AACCGCAAGAGC-AACCAGAAGAACCTCGGTGTCATTCGCAGCTCCAACCTGTGCACTGA 1017484 Query 255454 GATTACGTTGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGCGTC 255504 || | | |||| | | | ||||| ||||| ||||||||||| || Sbjct 1017483 AATCATCGAGTACACTGCTCCTGATGAGGTCGCCGTCTGCAACTTGGCTTC 1017433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335145276690